Gene : Potri.010G054800 P. trichocarpa v3.0
Defline:  (1 of 3) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  548
Name:  ? Potri.010G054800 Secondary Identifier:  ? PAC:26981612
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G054800 0.5kb upstream 0.5kb upstream 3413 true Chr10: 8486600-8490012 Populus trichocarpa
Potri.010G054800 0.5kb upstream 0.5kb upstream 500 false Chr10: 8489513-8490012 Populus trichocarpa
Potri.010G054800 0.5kb downstream 0.5kb downstream 3413 true Chr10: 8486100-8489512 Populus trichocarpa
Potri.010G054800 0.5kb downstream 0.5kb downstream 500 false Chr10: 8486100-8486599 Populus trichocarpa
Potri.010G054800 1.0kb upstream 1.0kb upstream 3913 true Chr10: 8486600-8490512 Populus trichocarpa
Potri.010G054800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8489513-8490512 Populus trichocarpa
Potri.010G054800 1.0kb downstream 1.0kb downstream 3913 true Chr10: 8485600-8489512 Populus trichocarpa
Potri.010G054800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8485600-8486599 Populus trichocarpa
Potri.010G054800 2.0kb upstream 2.0kb upstream 4913 true Chr10: 8486600-8491512 Populus trichocarpa
Potri.010G054800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8489513-8491512 Populus trichocarpa
Potri.010G054800 2.0kb downstream 2.0kb downstream 4913 true Chr10: 8484600-8489512 Populus trichocarpa
Potri.010G054800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8484600-8486599 Populus trichocarpa
Potri.010G054800 5.0kb upstream 5.0kb upstream 7913 true Chr10: 8486600-8494512 Populus trichocarpa
Potri.010G054800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8489513-8494512 Populus trichocarpa
Potri.010G054800 5.0kb downstream 5.0kb downstream 7913 true Chr10: 8481600-8489512 Populus trichocarpa
Potri.010G054800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8481600-8486599 Populus trichocarpa
Potri.010G054800 10.0kb upstream 10.0kb upstream 12913 true Chr10: 8486600-8499512 Populus trichocarpa
Potri.010G054800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8489513-8499512 Populus trichocarpa
Potri.010G054800 10.0kb downstream 10.0kb downstream 12913 true Chr10: 8476600-8489512 Populus trichocarpa
Potri.010G054800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8476600-8486599 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.229     High  
cufflinks 3.004       Low
cufflinks 10.614     High  
cufflinks 11.117     High  
cufflinks 4.607        
cufflinks 3.24       Low
cufflinks 11.954     High High
cufflinks 4.074        
cufflinks 9.137        
cufflinks 6.192        
cufflinks 5.679        
cufflinks 8.706        
cufflinks 11.144     High  
cufflinks 5.002        
cufflinks 3.768        
cufflinks 32.134     High High
cufflinks 3.181       Low
cufflinks 4.405        
cufflinks 5.442        
cufflinks 4.487        
cufflinks 3.111       Low
cufflinks 10.886     High  
cufflinks 10.461     High  
cufflinks 3.537        
cufflinks 4.45        
cufflinks 2.781        
cufflinks 2.964        
cufflinks 2.712        
cufflinks 3.065        
cufflinks 4.11        

0 Strain