Gene : Potri.010G021400 P. trichocarpa v3.0
Defline:  (1 of 3) K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) Genomic Order:  214
Name:  ? Potri.010G021400 Secondary Identifier:  ? PAC:26980529
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G021400 0.5kb upstream 0.5kb upstream 8789 true Chr10: 2999866-3008654 Populus trichocarpa
Potri.010G021400 0.5kb upstream 0.5kb upstream 500 false Chr10: 2999866-3000365 Populus trichocarpa
Potri.010G021400 0.5kb downstream 0.5kb downstream 8789 true Chr10: 3000366-3009154 Populus trichocarpa
Potri.010G021400 0.5kb downstream 0.5kb downstream 500 false Chr10: 3008655-3009154 Populus trichocarpa
Potri.010G021400 1.0kb upstream 1.0kb upstream 9289 true Chr10: 2999366-3008654 Populus trichocarpa
Potri.010G021400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2999366-3000365 Populus trichocarpa
Potri.010G021400 1.0kb downstream 1.0kb downstream 9289 true Chr10: 3000366-3009654 Populus trichocarpa
Potri.010G021400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3008655-3009654 Populus trichocarpa
Potri.010G021400 2.0kb upstream 2.0kb upstream 10289 true Chr10: 2998366-3008654 Populus trichocarpa
Potri.010G021400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2998366-3000365 Populus trichocarpa
Potri.010G021400 2.0kb downstream 2.0kb downstream 10289 true Chr10: 3000366-3010654 Populus trichocarpa
Potri.010G021400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3008655-3010654 Populus trichocarpa
Potri.010G021400 5.0kb upstream 5.0kb upstream 13289 true Chr10: 2995366-3008654 Populus trichocarpa
Potri.010G021400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2995366-3000365 Populus trichocarpa
Potri.010G021400 5.0kb downstream 5.0kb downstream 13289 true Chr10: 3000366-3013654 Populus trichocarpa
Potri.010G021400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3008655-3013654 Populus trichocarpa
Potri.010G021400 10.0kb upstream 10.0kb upstream 18289 true Chr10: 2990366-3008654 Populus trichocarpa
Potri.010G021400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2990366-3000365 Populus trichocarpa
Potri.010G021400 10.0kb downstream 10.0kb downstream 18289 true Chr10: 3000366-3018654 Populus trichocarpa
Potri.010G021400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3008655-3018654 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.728       Low
cufflinks 1.163        
cufflinks 1.534       High
cufflinks 0.835        
cufflinks 1.443       High
cufflinks 0.994        
cufflinks 0.972        
cufflinks 1.2        
cufflinks 0.822        
cufflinks 1.129        
cufflinks 1.098        
cufflinks 1.097        
cufflinks 1.398       High
cufflinks 1.207        
cufflinks 0.823        
cufflinks 0.515       Low
cufflinks 0.629       Low
cufflinks 1.467       High
cufflinks 1.123        
cufflinks 0.53       Low
cufflinks 0.949        
cufflinks 1.208        
cufflinks 1.137        
cufflinks 1.274        
cufflinks 43.213     High  
cufflinks 37.914     High  
cufflinks 34.811     High  
cufflinks 42.856     High  
cufflinks 42.084     High  
cufflinks 40.726     High  

0 Strain