Gene : Potri.010G014500 P. trichocarpa v3.0
Defline:  (1 of 1) PF00133//PF06827//PF08264 - tRNA synthetases class I (I, L, M and V) (tRNA-synt_1) // Zinc finger found in FPG and IleRS (zf-FPG_IleRS) // Anticodon-binding domain of tRNA (Anticodon_1) Genomic Order:  145
Name:  ? Potri.010G014500 Secondary Identifier:  ? PAC:26980332
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G014500 0.5kb upstream 0.5kb upstream 17136 true Chr10: 1812916-1830051 Populus trichocarpa
Potri.010G014500 0.5kb upstream 0.5kb upstream 500 false Chr10: 1812916-1813415 Populus trichocarpa
Potri.010G014500 0.5kb downstream 0.5kb downstream 17136 true Chr10: 1813416-1830551 Populus trichocarpa
Potri.010G014500 0.5kb downstream 0.5kb downstream 500 false Chr10: 1830052-1830551 Populus trichocarpa
Potri.010G014500 1.0kb upstream 1.0kb upstream 17636 true Chr10: 1812416-1830051 Populus trichocarpa
Potri.010G014500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1812416-1813415 Populus trichocarpa
Potri.010G014500 1.0kb downstream 1.0kb downstream 17636 true Chr10: 1813416-1831051 Populus trichocarpa
Potri.010G014500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1830052-1831051 Populus trichocarpa
Potri.010G014500 2.0kb upstream 2.0kb upstream 18636 true Chr10: 1811416-1830051 Populus trichocarpa
Potri.010G014500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1811416-1813415 Populus trichocarpa
Potri.010G014500 2.0kb downstream 2.0kb downstream 18636 true Chr10: 1813416-1832051 Populus trichocarpa
Potri.010G014500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1830052-1832051 Populus trichocarpa
Potri.010G014500 5.0kb upstream 5.0kb upstream 21636 true Chr10: 1808416-1830051 Populus trichocarpa
Potri.010G014500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1808416-1813415 Populus trichocarpa
Potri.010G014500 5.0kb downstream 5.0kb downstream 21636 true Chr10: 1813416-1835051 Populus trichocarpa
Potri.010G014500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1830052-1835051 Populus trichocarpa
Potri.010G014500 10.0kb upstream 10.0kb upstream 26636 true Chr10: 1803416-1830051 Populus trichocarpa
Potri.010G014500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1803416-1813415 Populus trichocarpa
Potri.010G014500 10.0kb downstream 10.0kb downstream 26636 true Chr10: 1813416-1840051 Populus trichocarpa
Potri.010G014500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1830052-1840051 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.905       High
cufflinks 1.94       High
cufflinks 1.08        
cufflinks 1.638        
cufflinks 0.6        
cufflinks 1.223        
cufflinks 1.162        
cufflinks 0.656        
cufflinks 1.646        
cufflinks 0.385       Low
cufflinks 1.446        
cufflinks 0.654        
cufflinks 0.563        
cufflinks 1.93       High
cufflinks 1.299        
cufflinks 0.363       Low
cufflinks 1.163        
cufflinks 1.317        
cufflinks 0.271       Low
cufflinks 0.533        
cufflinks 1.409        
cufflinks 0.508       Low
cufflinks 1.361        
cufflinks 1.169        
cufflinks 7.405       Low
cufflinks 10.756        
cufflinks 11.653        
cufflinks 11.826        
cufflinks 11.404        
cufflinks 9.981        

0 Strain