Gene : Potri.010G027900 P. trichocarpa v3.0
Defline:  (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Genomic Order:  279
Name:  ? Potri.010G027900 Secondary Identifier:  ? PAC:26982478
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G027900 0.5kb upstream 0.5kb upstream 5103 true Chr10: 3882773-3887875 Populus trichocarpa
Potri.010G027900 0.5kb upstream 0.5kb upstream 500 false Chr10: 3887376-3887875 Populus trichocarpa
Potri.010G027900 0.5kb downstream 0.5kb downstream 5103 true Chr10: 3882273-3887375 Populus trichocarpa
Potri.010G027900 0.5kb downstream 0.5kb downstream 500 false Chr10: 3882273-3882772 Populus trichocarpa
Potri.010G027900 1.0kb upstream 1.0kb upstream 5603 true Chr10: 3882773-3888375 Populus trichocarpa
Potri.010G027900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3887376-3888375 Populus trichocarpa
Potri.010G027900 1.0kb downstream 1.0kb downstream 5603 true Chr10: 3881773-3887375 Populus trichocarpa
Potri.010G027900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3881773-3882772 Populus trichocarpa
Potri.010G027900 2.0kb upstream 2.0kb upstream 6603 true Chr10: 3882773-3889375 Populus trichocarpa
Potri.010G027900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3887376-3889375 Populus trichocarpa
Potri.010G027900 2.0kb downstream 2.0kb downstream 6603 true Chr10: 3880773-3887375 Populus trichocarpa
Potri.010G027900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3880773-3882772 Populus trichocarpa
Potri.010G027900 5.0kb upstream 5.0kb upstream 9603 true Chr10: 3882773-3892375 Populus trichocarpa
Potri.010G027900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3887376-3892375 Populus trichocarpa
Potri.010G027900 5.0kb downstream 5.0kb downstream 9603 true Chr10: 3877773-3887375 Populus trichocarpa
Potri.010G027900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3877773-3882772 Populus trichocarpa
Potri.010G027900 10.0kb upstream 10.0kb upstream 14603 true Chr10: 3882773-3897375 Populus trichocarpa
Potri.010G027900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3887376-3897375 Populus trichocarpa
Potri.010G027900 10.0kb downstream 10.0kb downstream 14603 true Chr10: 3872773-3887375 Populus trichocarpa
Potri.010G027900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3872773-3882772 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.548       Low
cufflinks 0.613        
cufflinks 0.703        
cufflinks 0.849        
cufflinks 0.525       Low
cufflinks 0.899        
cufflinks 0.799        
cufflinks 0.531       Low
cufflinks 1.116       High
cufflinks 0.489       Low
cufflinks 1.007       High
cufflinks 0.81        
cufflinks 0.998        
cufflinks 0.598        
cufflinks 1.033       High
cufflinks 0.637        
cufflinks 1.027       High
cufflinks 0.563       Low
cufflinks 0.875        
cufflinks 0.902        
cufflinks 1.028       High
cufflinks 0.881        
cufflinks 0.688        
cufflinks 0.997        
cufflinks 15.445        
cufflinks 21.74       High
cufflinks 20.478        
cufflinks 17.483        
cufflinks 11.44       Low
cufflinks 19.942        

0 Strain