Gene : Potri.010G062300 P. trichocarpa v3.0
Defline:  (1 of 1) K18010 - 7-hydroxymethyl chlorophyll a reductase (HCAR) Genomic Order:  623
Name:  ? Potri.010G062300 Secondary Identifier:  ? PAC:26980222
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5068 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G062300 0.5kb upstream 0.5kb upstream 6688 true Chr10: 9033029-9039716 Populus trichocarpa
Potri.010G062300 0.5kb upstream 0.5kb upstream 500 false Chr10: 9033029-9033528 Populus trichocarpa
Potri.010G062300 0.5kb downstream 0.5kb downstream 6688 true Chr10: 9033529-9040216 Populus trichocarpa
Potri.010G062300 0.5kb downstream 0.5kb downstream 500 false Chr10: 9039717-9040216 Populus trichocarpa
Potri.010G062300 1.0kb upstream 1.0kb upstream 7188 true Chr10: 9032529-9039716 Populus trichocarpa
Potri.010G062300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9032529-9033528 Populus trichocarpa
Potri.010G062300 1.0kb downstream 1.0kb downstream 7188 true Chr10: 9033529-9040716 Populus trichocarpa
Potri.010G062300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9039717-9040716 Populus trichocarpa
Potri.010G062300 2.0kb upstream 2.0kb upstream 8188 true Chr10: 9031529-9039716 Populus trichocarpa
Potri.010G062300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9031529-9033528 Populus trichocarpa
Potri.010G062300 2.0kb downstream 2.0kb downstream 8188 true Chr10: 9033529-9041716 Populus trichocarpa
Potri.010G062300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9039717-9041716 Populus trichocarpa
Potri.010G062300 5.0kb upstream 5.0kb upstream 11188 true Chr10: 9028529-9039716 Populus trichocarpa
Potri.010G062300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9028529-9033528 Populus trichocarpa
Potri.010G062300 5.0kb downstream 5.0kb downstream 11188 true Chr10: 9033529-9044716 Populus trichocarpa
Potri.010G062300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9039717-9044716 Populus trichocarpa
Potri.010G062300 10.0kb upstream 10.0kb upstream 16188 true Chr10: 9023529-9039716 Populus trichocarpa
Potri.010G062300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9023529-9033528 Populus trichocarpa
Potri.010G062300 10.0kb downstream 10.0kb downstream 16188 true Chr10: 9033529-9049716 Populus trichocarpa
Potri.010G062300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9039717-9049716 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.95        
cufflinks 4.085        
cufflinks 6.3        
cufflinks 0.228       Low
cufflinks 4.961        
cufflinks 0.117     Low Low
cufflinks 2.594        
cufflinks 2.771        
cufflinks 2.512        
cufflinks 5.366        
cufflinks 3.933        
cufflinks 1.959        
cufflinks 3.398        
cufflinks 0.156       Low
cufflinks 5.58        
cufflinks 8.929       High
cufflinks 1.066        
cufflinks 0.203       Low
cufflinks 1.977        
cufflinks 3.402        
cufflinks 3.274        
cufflinks 1.452        
cufflinks 3.618        
cufflinks 2.998        
cufflinks 28.174       High
cufflinks 19.649        
cufflinks 17.059        
cufflinks 21.488        
cufflinks 20.167        
cufflinks 19.289        

0 Strain