Gene : Potri.010G200200 P. trichocarpa v3.0
Defline:  (1 of 2) K01952 - phosphoribosylformylglycinamidine synthase (purL, PFAS) Genomic Order:  2002
Name:  ? Potri.010G200200 Secondary Identifier:  ? PAC:26980992
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6121 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.010G200200 0.5kb upstream 0.5kb upstream 6266 true Chr10: 19225621-19231886 Populus trichocarpa
Potri.010G200200 0.5kb upstream 0.5kb upstream 500 false Chr10: 19225621-19226120 Populus trichocarpa
Potri.010G200200 0.5kb downstream 0.5kb downstream 6266 true Chr10: 19226121-19232386 Populus trichocarpa
Potri.010G200200 0.5kb downstream 0.5kb downstream 500 false Chr10: 19231887-19232386 Populus trichocarpa
Potri.010G200200 1.0kb upstream 1.0kb upstream 6766 true Chr10: 19225121-19231886 Populus trichocarpa
Potri.010G200200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19225121-19226120 Populus trichocarpa
Potri.010G200200 1.0kb downstream 1.0kb downstream 6766 true Chr10: 19226121-19232886 Populus trichocarpa
Potri.010G200200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19231887-19232886 Populus trichocarpa
Potri.010G200200 2.0kb upstream 2.0kb upstream 7766 true Chr10: 19224121-19231886 Populus trichocarpa
Potri.010G200200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19224121-19226120 Populus trichocarpa
Potri.010G200200 2.0kb downstream 2.0kb downstream 7766 true Chr10: 19226121-19233886 Populus trichocarpa
Potri.010G200200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19231887-19233886 Populus trichocarpa
Potri.010G200200 5.0kb upstream 5.0kb upstream 10766 true Chr10: 19221121-19231886 Populus trichocarpa
Potri.010G200200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19221121-19226120 Populus trichocarpa
Potri.010G200200 5.0kb downstream 5.0kb downstream 10766 true Chr10: 19226121-19236886 Populus trichocarpa
Potri.010G200200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19231887-19236886 Populus trichocarpa
Potri.010G200200 10.0kb upstream 10.0kb upstream 15766 true Chr10: 19216121-19231886 Populus trichocarpa
Potri.010G200200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19216121-19226120 Populus trichocarpa
Potri.010G200200 10.0kb downstream 10.0kb downstream 15766 true Chr10: 19226121-19241886 Populus trichocarpa
Potri.010G200200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19231887-19241886 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.088       Low
cufflinks 5.208        
cufflinks 3.504        
cufflinks 4.091        
cufflinks 4.891        
cufflinks 4.674        
cufflinks 3.953        
cufflinks 8.018       High
cufflinks 5.449        
cufflinks 6.225        
cufflinks 2.74       Low
cufflinks 5.493        
cufflinks 5.516        
cufflinks 4.026        
cufflinks 9.35     High High
cufflinks 2.903        
cufflinks 9.66       High
cufflinks 9.53       High
cufflinks 1.496       Low
cufflinks 3.171        
cufflinks 5.923        
cufflinks 3.022        
cufflinks 4.437        
cufflinks 5.315        
cufflinks 14.163       Low
cufflinks 23.831        
cufflinks 23.165        
cufflinks 27.26       High
cufflinks 20.497        
cufflinks 20.909        

0 Strain