Gene : Potri.011G043800 P. trichocarpa v3.0
Defline:  (1 of 2) K12184 - ESCRT-I complex subunit VPS28 (VPS28) Genomic Order:  438
Name:  ? Potri.011G043800 Secondary Identifier:  ? PAC:27000726
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G043800 0.5kb upstream 0.5kb upstream 2488 true Chr11: 3721759-3724246 Populus trichocarpa
Potri.011G043800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3723747-3724246 Populus trichocarpa
Potri.011G043800 0.5kb downstream 0.5kb downstream 2488 true Chr11: 3721259-3723746 Populus trichocarpa
Potri.011G043800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3721259-3721758 Populus trichocarpa
Potri.011G043800 1.0kb upstream 1.0kb upstream 2988 true Chr11: 3721759-3724746 Populus trichocarpa
Potri.011G043800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3723747-3724746 Populus trichocarpa
Potri.011G043800 1.0kb downstream 1.0kb downstream 2988 true Chr11: 3720759-3723746 Populus trichocarpa
Potri.011G043800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3720759-3721758 Populus trichocarpa
Potri.011G043800 2.0kb upstream 2.0kb upstream 3988 true Chr11: 3721759-3725746 Populus trichocarpa
Potri.011G043800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3723747-3725746 Populus trichocarpa
Potri.011G043800 2.0kb downstream 2.0kb downstream 3988 true Chr11: 3719759-3723746 Populus trichocarpa
Potri.011G043800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3719759-3721758 Populus trichocarpa
Potri.011G043800 5.0kb upstream 5.0kb upstream 6988 true Chr11: 3721759-3728746 Populus trichocarpa
Potri.011G043800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3723747-3728746 Populus trichocarpa
Potri.011G043800 5.0kb downstream 5.0kb downstream 6988 true Chr11: 3716759-3723746 Populus trichocarpa
Potri.011G043800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3716759-3721758 Populus trichocarpa
Potri.011G043800 10.0kb upstream 10.0kb upstream 11988 true Chr11: 3721759-3733746 Populus trichocarpa
Potri.011G043800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3723747-3733746 Populus trichocarpa
Potri.011G043800 10.0kb downstream 10.0kb downstream 11988 true Chr11: 3711759-3723746 Populus trichocarpa
Potri.011G043800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3711759-3721758 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.157     High  
cufflinks 6.062        
cufflinks 7.59        
cufflinks 14.592     High High
cufflinks 6.914        
cufflinks 9.132     High  
cufflinks 6.768        
cufflinks 6.184        
cufflinks 5.889        
cufflinks 7.393        
cufflinks 6.329        
cufflinks 8.798        
cufflinks 3.667       Low
cufflinks 14.917     High High
cufflinks 7.913        
cufflinks 7.34        
cufflinks 5.785        
cufflinks 15.248     High High
cufflinks 14.121     High High
cufflinks 5.34        
cufflinks 9.052     High  
cufflinks 5.358        
cufflinks 13.394     High High
cufflinks 5.015       Low
cufflinks 32.177     High  
cufflinks 45.323     High  
cufflinks 35.467     High  
cufflinks 30.625     High  
cufflinks 36.388     High  
cufflinks 43.689     High  

0 Strain