Gene : Potri.011G116200 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR19317:SF1 - PRA1 FAMILY PROTEIN 2 Genomic Order:  1162
Name:  ? Potri.011G116200 Secondary Identifier:  ? PAC:27000827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G116200 0.5kb upstream 0.5kb upstream 2995 true Chr11: 14115285-14118279 Populus trichocarpa
Potri.011G116200 0.5kb upstream 0.5kb upstream 500 false Chr11: 14115285-14115784 Populus trichocarpa
Potri.011G116200 0.5kb downstream 0.5kb downstream 2995 true Chr11: 14115785-14118779 Populus trichocarpa
Potri.011G116200 0.5kb downstream 0.5kb downstream 500 false Chr11: 14118280-14118779 Populus trichocarpa
Potri.011G116200 1.0kb upstream 1.0kb upstream 3495 true Chr11: 14114785-14118279 Populus trichocarpa
Potri.011G116200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14114785-14115784 Populus trichocarpa
Potri.011G116200 1.0kb downstream 1.0kb downstream 3495 true Chr11: 14115785-14119279 Populus trichocarpa
Potri.011G116200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14118280-14119279 Populus trichocarpa
Potri.011G116200 2.0kb upstream 2.0kb upstream 4495 true Chr11: 14113785-14118279 Populus trichocarpa
Potri.011G116200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14113785-14115784 Populus trichocarpa
Potri.011G116200 2.0kb downstream 2.0kb downstream 4495 true Chr11: 14115785-14120279 Populus trichocarpa
Potri.011G116200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14118280-14120279 Populus trichocarpa
Potri.011G116200 5.0kb upstream 5.0kb upstream 7495 true Chr11: 14110785-14118279 Populus trichocarpa
Potri.011G116200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14110785-14115784 Populus trichocarpa
Potri.011G116200 5.0kb downstream 5.0kb downstream 7495 true Chr11: 14115785-14123279 Populus trichocarpa
Potri.011G116200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14118280-14123279 Populus trichocarpa
Potri.011G116200 10.0kb upstream 10.0kb upstream 12495 true Chr11: 14105785-14118279 Populus trichocarpa
Potri.011G116200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14105785-14115784 Populus trichocarpa
Potri.011G116200 10.0kb downstream 10.0kb downstream 12495 true Chr11: 14115785-14128279 Populus trichocarpa
Potri.011G116200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14118280-14128279 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.24        
cufflinks 0.317       Low
cufflinks 0.385        
cufflinks 0.453        
cufflinks 0.454        
cufflinks 0.406        
cufflinks 0.466        
cufflinks 0.423        
cufflinks 0.323       Low
cufflinks 0.451        
cufflinks 0.354        
cufflinks 0.424        
cufflinks 0.656       High
cufflinks 0.332       Low
cufflinks 0.52        
cufflinks 0.323       Low
cufflinks 0.451        
cufflinks 0.305       Low
cufflinks 0.497        
cufflinks 0.861       High
cufflinks 0.399        
cufflinks 0.456        
cufflinks 0.375        
cufflinks 0.45        
cufflinks 0.42        
cufflinks 2.551       High
cufflinks 1.852        
cufflinks 1.901        
cufflinks 1.966        
cufflinks 2.943       High

0 Strain