Gene : Potri.011G099500 P. trichocarpa v3.0
Defline:  (1 of 2) 2.5.1.81 - Geranylfarnesyl diphosphate synthase / FGPP synthase Genomic Order:  995
Name:  ? Potri.011G099500 Secondary Identifier:  ? PAC:27002406
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5805 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6520 Populus trichocarpa pathologic  
Ptrichocarpa HEXPPSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-5864 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5807 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5783 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5120 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G099500 0.5kb upstream 0.5kb upstream 4445 true Chr11: 12110746-12115190 Populus trichocarpa
Potri.011G099500 0.5kb upstream 0.5kb upstream 500 false Chr11: 12114691-12115190 Populus trichocarpa
Potri.011G099500 0.5kb downstream 0.5kb downstream 4445 true Chr11: 12110246-12114690 Populus trichocarpa
Potri.011G099500 0.5kb downstream 0.5kb downstream 500 false Chr11: 12110246-12110745 Populus trichocarpa
Potri.011G099500 1.0kb upstream 1.0kb upstream 4945 true Chr11: 12110746-12115690 Populus trichocarpa
Potri.011G099500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12114691-12115690 Populus trichocarpa
Potri.011G099500 1.0kb downstream 1.0kb downstream 4945 true Chr11: 12109746-12114690 Populus trichocarpa
Potri.011G099500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12109746-12110745 Populus trichocarpa
Potri.011G099500 2.0kb upstream 2.0kb upstream 5945 true Chr11: 12110746-12116690 Populus trichocarpa
Potri.011G099500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12114691-12116690 Populus trichocarpa
Potri.011G099500 2.0kb downstream 2.0kb downstream 5945 true Chr11: 12108746-12114690 Populus trichocarpa
Potri.011G099500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12108746-12110745 Populus trichocarpa
Potri.011G099500 5.0kb upstream 5.0kb upstream 8945 true Chr11: 12110746-12119690 Populus trichocarpa
Potri.011G099500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12114691-12119690 Populus trichocarpa
Potri.011G099500 5.0kb downstream 5.0kb downstream 8945 true Chr11: 12105746-12114690 Populus trichocarpa
Potri.011G099500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12105746-12110745 Populus trichocarpa
Potri.011G099500 10.0kb upstream 10.0kb upstream 13945 true Chr11: 12110746-12124690 Populus trichocarpa
Potri.011G099500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12114691-12124690 Populus trichocarpa
Potri.011G099500 10.0kb downstream 10.0kb downstream 13945 true Chr11: 12100746-12114690 Populus trichocarpa
Potri.011G099500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12100746-12110745 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain