Gene : Potri.011G107000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR12604//PTHR12604:SF2 - KU AUTOANTIGEN DNA HELICASE // X-RAY REPAIR CROSS-COMPLEMENTING PROTEIN 6 Genomic Order:  1070
Name:  ? Potri.011G107000 Secondary Identifier:  ? PAC:27002309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G107000 0.5kb upstream 0.5kb upstream 2024 true Chr11: 13027635-13029658 Populus trichocarpa
Potri.011G107000 0.5kb upstream 0.5kb upstream 500 false Chr11: 13029159-13029658 Populus trichocarpa
Potri.011G107000 0.5kb downstream 0.5kb downstream 2024 true Chr11: 13027135-13029158 Populus trichocarpa
Potri.011G107000 0.5kb downstream 0.5kb downstream 500 false Chr11: 13027135-13027634 Populus trichocarpa
Potri.011G107000 1.0kb upstream 1.0kb upstream 2524 true Chr11: 13027635-13030158 Populus trichocarpa
Potri.011G107000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13029159-13030158 Populus trichocarpa
Potri.011G107000 1.0kb downstream 1.0kb downstream 2524 true Chr11: 13026635-13029158 Populus trichocarpa
Potri.011G107000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13026635-13027634 Populus trichocarpa
Potri.011G107000 2.0kb upstream 2.0kb upstream 3524 true Chr11: 13027635-13031158 Populus trichocarpa
Potri.011G107000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13029159-13031158 Populus trichocarpa
Potri.011G107000 2.0kb downstream 2.0kb downstream 3524 true Chr11: 13025635-13029158 Populus trichocarpa
Potri.011G107000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13025635-13027634 Populus trichocarpa
Potri.011G107000 5.0kb upstream 5.0kb upstream 6524 true Chr11: 13027635-13034158 Populus trichocarpa
Potri.011G107000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13029159-13034158 Populus trichocarpa
Potri.011G107000 5.0kb downstream 5.0kb downstream 6524 true Chr11: 13022635-13029158 Populus trichocarpa
Potri.011G107000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13022635-13027634 Populus trichocarpa
Potri.011G107000 10.0kb upstream 10.0kb upstream 11524 true Chr11: 13027635-13039158 Populus trichocarpa
Potri.011G107000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13029159-13039158 Populus trichocarpa
Potri.011G107000 10.0kb downstream 10.0kb downstream 11524 true Chr11: 13017635-13029158 Populus trichocarpa
Potri.011G107000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13017635-13027634 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119     Low  
cufflinks 0.171        
cufflinks 0.224        
cufflinks 0.185        
cufflinks 0.39       High
cufflinks 0.21        
cufflinks 0.157     Low  
cufflinks 0.278        
cufflinks 0.112     Low Low
cufflinks 0.407       High
cufflinks 0.177        
cufflinks 0.199        
cufflinks 0.122        
cufflinks 0.262        
cufflinks 0.215        
cufflinks 0.396       High
cufflinks 0.297        
cufflinks 0.227        
cufflinks 0.14     Low  
cufflinks 0.317        
cufflinks 0.08     Low Low
cufflinks 0.329       High
cufflinks 0.062     Low Low
cufflinks 0.081     Low Low
cufflinks 4.229        
cufflinks 3.638        
cufflinks 4.768        
cufflinks 6.884       High
cufflinks 9.199       High
cufflinks 2.67        

0 Strain