Gene : Potri.015G094600 P. trichocarpa v3.0
Defline:  (1 of 2) PF02037//PF10172 - SAP domain (SAP) // Det1 complexing ubiquitin ligase (DDA1) Genomic Order:  946
Name:  ? Potri.015G094600 Secondary Identifier:  ? PAC:27017905
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G094600 0.5kb upstream 0.5kb upstream 4275 true Chr15: 11579727-11584001 Populus trichocarpa
Potri.015G094600 0.5kb upstream 0.5kb upstream 500 false Chr15: 11583502-11584001 Populus trichocarpa
Potri.015G094600 0.5kb downstream 0.5kb downstream 4275 true Chr15: 11579227-11583501 Populus trichocarpa
Potri.015G094600 0.5kb downstream 0.5kb downstream 500 false Chr15: 11579227-11579726 Populus trichocarpa
Potri.015G094600 1.0kb upstream 1.0kb upstream 4775 true Chr15: 11579727-11584501 Populus trichocarpa
Potri.015G094600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11583502-11584501 Populus trichocarpa
Potri.015G094600 1.0kb downstream 1.0kb downstream 4775 true Chr15: 11578727-11583501 Populus trichocarpa
Potri.015G094600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11578727-11579726 Populus trichocarpa
Potri.015G094600 2.0kb upstream 2.0kb upstream 5775 true Chr15: 11579727-11585501 Populus trichocarpa
Potri.015G094600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11583502-11585501 Populus trichocarpa
Potri.015G094600 2.0kb downstream 2.0kb downstream 5775 true Chr15: 11577727-11583501 Populus trichocarpa
Potri.015G094600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11577727-11579726 Populus trichocarpa
Potri.015G094600 5.0kb upstream 5.0kb upstream 8775 true Chr15: 11579727-11588501 Populus trichocarpa
Potri.015G094600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11583502-11588501 Populus trichocarpa
Potri.015G094600 5.0kb downstream 5.0kb downstream 8775 true Chr15: 11574727-11583501 Populus trichocarpa
Potri.015G094600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11574727-11579726 Populus trichocarpa
Potri.015G094600 10.0kb upstream 10.0kb upstream 13775 true Chr15: 11579727-11593501 Populus trichocarpa
Potri.015G094600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11583502-11593501 Populus trichocarpa
Potri.015G094600 10.0kb downstream 10.0kb downstream 13775 true Chr15: 11569727-11583501 Populus trichocarpa
Potri.015G094600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11569727-11579726 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.889       Low
cufflinks 1.39        
cufflinks 1.962        
cufflinks 1.637        
cufflinks 2.178        
cufflinks 2.0        
cufflinks 1.966        
cufflinks 2.034        
cufflinks 1.762        
cufflinks 1.062       Low
cufflinks 1.324        
cufflinks 2.36        
cufflinks 1.3        
cufflinks 1.487        
cufflinks 1.369        
cufflinks 1.864        
cufflinks 5.055       High
cufflinks 2.98       High
cufflinks 3.24       High
cufflinks 0.806       Low
cufflinks 1.366        
cufflinks 1.077       Low
cufflinks 2.999       High
cufflinks 1.99        
cufflinks 13.792        
cufflinks 11.452        
cufflinks 11.536        
cufflinks 19.57       High
cufflinks 19.821       High
cufflinks 10.231        

0 Strain