Gene : Potri.015G097200 P. trichocarpa v3.0
Defline:  (1 of 2) K01652 - acetolactate synthase I/II/III large subunit (E2.2.1.6L, ilvB, ilvG, ilvI) Genomic Order:  972
Name:  ? Potri.015G097200 Secondary Identifier:  ? PAC:27017467
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G097200 0.5kb upstream 0.5kb upstream 3028 true Chr15: 11716976-11720003 Populus trichocarpa
Potri.015G097200 0.5kb upstream 0.5kb upstream 500 false Chr15: 11719504-11720003 Populus trichocarpa
Potri.015G097200 0.5kb downstream 0.5kb downstream 3028 true Chr15: 11716476-11719503 Populus trichocarpa
Potri.015G097200 0.5kb downstream 0.5kb downstream 500 false Chr15: 11716476-11716975 Populus trichocarpa
Potri.015G097200 1.0kb upstream 1.0kb upstream 3528 true Chr15: 11716976-11720503 Populus trichocarpa
Potri.015G097200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11719504-11720503 Populus trichocarpa
Potri.015G097200 1.0kb downstream 1.0kb downstream 3528 true Chr15: 11715976-11719503 Populus trichocarpa
Potri.015G097200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11715976-11716975 Populus trichocarpa
Potri.015G097200 2.0kb upstream 2.0kb upstream 4528 true Chr15: 11716976-11721503 Populus trichocarpa
Potri.015G097200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11719504-11721503 Populus trichocarpa
Potri.015G097200 2.0kb downstream 2.0kb downstream 4528 true Chr15: 11714976-11719503 Populus trichocarpa
Potri.015G097200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11714976-11716975 Populus trichocarpa
Potri.015G097200 5.0kb upstream 5.0kb upstream 7528 true Chr15: 11716976-11724503 Populus trichocarpa
Potri.015G097200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11719504-11724503 Populus trichocarpa
Potri.015G097200 5.0kb downstream 5.0kb downstream 7528 true Chr15: 11711976-11719503 Populus trichocarpa
Potri.015G097200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11711976-11716975 Populus trichocarpa
Potri.015G097200 10.0kb upstream 10.0kb upstream 12528 true Chr15: 11716976-11729503 Populus trichocarpa
Potri.015G097200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11719504-11729503 Populus trichocarpa
Potri.015G097200 10.0kb downstream 10.0kb downstream 12528 true Chr15: 11706976-11719503 Populus trichocarpa
Potri.015G097200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11706976-11716975 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.315        
cufflinks 12.995     High Low
cufflinks 46.369     High High
cufflinks 16.677     High Low
cufflinks 39.93     High  
cufflinks 23.015     High  
cufflinks 48.661     High High
cufflinks 26.145     High  
cufflinks 29.195     High  
cufflinks 25.966     High  
cufflinks 27.697     High  
cufflinks 20.943     High  
cufflinks 40.649     High  
cufflinks 11.359     High Low
cufflinks 20.807     High  
cufflinks 46.124     High High
cufflinks 28.964     High  
cufflinks 53.911     High High
cufflinks 13.82     High Low
cufflinks 19.548     High  
cufflinks 19.103     High  
cufflinks 23.099     High  
cufflinks 59.207     High High
cufflinks 24.096     High  
cufflinks 25.478     High  
cufflinks 24.475       Low
cufflinks 34.583     High  
cufflinks 32.068     High  
cufflinks 28.007        
cufflinks 29.846     High  

0 Strain