Gene : Potri.011G043400 P. trichocarpa v3.0
Defline:  (1 of 2) K14851 - ribosomal RNA-processing protein 17 (RRP17, NOL12) Genomic Order:  434
Name:  ? Potri.011G043400 Secondary Identifier:  ? PAC:27001901
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G043400 0.5kb upstream 0.5kb upstream 3717 true Chr11: 3685953-3689669 Populus trichocarpa
Potri.011G043400 0.5kb upstream 0.5kb upstream 500 false Chr11: 3689170-3689669 Populus trichocarpa
Potri.011G043400 0.5kb downstream 0.5kb downstream 3717 true Chr11: 3685453-3689169 Populus trichocarpa
Potri.011G043400 0.5kb downstream 0.5kb downstream 500 false Chr11: 3685453-3685952 Populus trichocarpa
Potri.011G043400 1.0kb upstream 1.0kb upstream 4217 true Chr11: 3685953-3690169 Populus trichocarpa
Potri.011G043400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3689170-3690169 Populus trichocarpa
Potri.011G043400 1.0kb downstream 1.0kb downstream 4217 true Chr11: 3684953-3689169 Populus trichocarpa
Potri.011G043400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3684953-3685952 Populus trichocarpa
Potri.011G043400 2.0kb upstream 2.0kb upstream 5217 true Chr11: 3685953-3691169 Populus trichocarpa
Potri.011G043400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3689170-3691169 Populus trichocarpa
Potri.011G043400 2.0kb downstream 2.0kb downstream 5217 true Chr11: 3683953-3689169 Populus trichocarpa
Potri.011G043400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3683953-3685952 Populus trichocarpa
Potri.011G043400 5.0kb upstream 5.0kb upstream 8217 true Chr11: 3685953-3694169 Populus trichocarpa
Potri.011G043400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3689170-3694169 Populus trichocarpa
Potri.011G043400 5.0kb downstream 5.0kb downstream 8217 true Chr11: 3680953-3689169 Populus trichocarpa
Potri.011G043400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3680953-3685952 Populus trichocarpa
Potri.011G043400 10.0kb upstream 10.0kb upstream 13217 true Chr11: 3685953-3699169 Populus trichocarpa
Potri.011G043400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3689170-3699169 Populus trichocarpa
Potri.011G043400 10.0kb downstream 10.0kb downstream 13217 true Chr11: 3675953-3689169 Populus trichocarpa
Potri.011G043400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3675953-3685952 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.289       Low
cufflinks 4.853       Low
cufflinks 5.832        
cufflinks 5.934        
cufflinks 6.866        
cufflinks 10.672     High High
cufflinks 6.145        
cufflinks 8.869       High
cufflinks 5.431        
cufflinks 6.575        
cufflinks 5.116        
cufflinks 6.883        
cufflinks 8.391     High High
cufflinks 6.359        
cufflinks 8.651       High
cufflinks 8.132        
cufflinks 3.78       Low
cufflinks 6.126        
cufflinks 5.553        
cufflinks 7.21        
cufflinks 7.556        
cufflinks 9.599       High
cufflinks 6.433        
cufflinks 5.688        
cufflinks 15.024        
cufflinks 12.455        
cufflinks 15.621        
cufflinks 28.946       High
cufflinks 23.993       High
cufflinks 12.126        

0 Strain