Gene : Potri.011G082800 P. trichocarpa v3.0
Defline:  (1 of 1) 2.6.1.13 - Ornithine aminotransferase / Ornithine--oxo-acid transaminase Genomic Order:  828
Name:  ? Potri.011G082800 Secondary Identifier:  ? PAC:27001610
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARGASEDEG-PWY Populus trichocarpa pathologic  
Ptrichocarpa ARG-PRO-PWY Populus trichocarpa pathologic  
Ptrichocarpa ARGININE-SYN4-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3341 Populus trichocarpa pathologic  
Ptrichocarpa CITRULBIO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6922 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G082800 0.5kb upstream 0.5kb upstream 13897 true Chr11: 8312619-8326515 Populus trichocarpa
Potri.011G082800 0.5kb upstream 0.5kb upstream 500 false Chr11: 8312619-8313118 Populus trichocarpa
Potri.011G082800 0.5kb downstream 0.5kb downstream 13897 true Chr11: 8313119-8327015 Populus trichocarpa
Potri.011G082800 0.5kb downstream 0.5kb downstream 500 false Chr11: 8326516-8327015 Populus trichocarpa
Potri.011G082800 1.0kb upstream 1.0kb upstream 14397 true Chr11: 8312119-8326515 Populus trichocarpa
Potri.011G082800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8312119-8313118 Populus trichocarpa
Potri.011G082800 1.0kb downstream 1.0kb downstream 14397 true Chr11: 8313119-8327515 Populus trichocarpa
Potri.011G082800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8326516-8327515 Populus trichocarpa
Potri.011G082800 2.0kb upstream 2.0kb upstream 15397 true Chr11: 8311119-8326515 Populus trichocarpa
Potri.011G082800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8311119-8313118 Populus trichocarpa
Potri.011G082800 2.0kb downstream 2.0kb downstream 15397 true Chr11: 8313119-8328515 Populus trichocarpa
Potri.011G082800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8326516-8328515 Populus trichocarpa
Potri.011G082800 5.0kb upstream 5.0kb upstream 18397 true Chr11: 8308119-8326515 Populus trichocarpa
Potri.011G082800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8308119-8313118 Populus trichocarpa
Potri.011G082800 5.0kb downstream 5.0kb downstream 18397 true Chr11: 8313119-8331515 Populus trichocarpa
Potri.011G082800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8326516-8331515 Populus trichocarpa
Potri.011G082800 10.0kb upstream 10.0kb upstream 23397 true Chr11: 8303119-8326515 Populus trichocarpa
Potri.011G082800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8303119-8313118 Populus trichocarpa
Potri.011G082800 10.0kb downstream 10.0kb downstream 23397 true Chr11: 8313119-8336515 Populus trichocarpa
Potri.011G082800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8326516-8336515 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.511        
cufflinks 0.593        
cufflinks 1.095        
cufflinks 1.127        
cufflinks 0.594        
cufflinks 0.503        
cufflinks 0.477       Low
cufflinks 1.622       High
cufflinks 0.886        
cufflinks 0.564        
cufflinks 0.559        
cufflinks 1.628       High
cufflinks 0.632        
cufflinks 0.714        
cufflinks 0.765        
cufflinks 1.18        
cufflinks 2.138       High
cufflinks 0.432       Low
cufflinks 0.617        
cufflinks 0.492       Low
cufflinks 1.622       High
cufflinks 0.776        
cufflinks 0.556        
cufflinks 0.859        
cufflinks 34.354     High  
cufflinks 32.603     High  
cufflinks 35.442     High  
cufflinks 27.569        
cufflinks 31.442     High  
cufflinks 32.328     High  

0 Strain