Gene : Potri.015G100600 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11177//PTHR11177:SF190 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  1006
Name:  ? Potri.015G100600 Secondary Identifier:  ? PAC:27017711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6902 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.015G100600 0.5kb upstream 0.5kb upstream 2091 true Chr15: 11919371-11921461 Populus trichocarpa
Potri.015G100600 0.5kb upstream 0.5kb upstream 500 false Chr15: 11919371-11919870 Populus trichocarpa
Potri.015G100600 0.5kb downstream 0.5kb downstream 2091 true Chr15: 11919871-11921961 Populus trichocarpa
Potri.015G100600 0.5kb downstream 0.5kb downstream 500 false Chr15: 11921462-11921961 Populus trichocarpa
Potri.015G100600 1.0kb upstream 1.0kb upstream 2591 true Chr15: 11918871-11921461 Populus trichocarpa
Potri.015G100600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11918871-11919870 Populus trichocarpa
Potri.015G100600 1.0kb downstream 1.0kb downstream 2591 true Chr15: 11919871-11922461 Populus trichocarpa
Potri.015G100600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11921462-11922461 Populus trichocarpa
Potri.015G100600 2.0kb upstream 2.0kb upstream 3591 true Chr15: 11917871-11921461 Populus trichocarpa
Potri.015G100600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11917871-11919870 Populus trichocarpa
Potri.015G100600 2.0kb downstream 2.0kb downstream 3591 true Chr15: 11919871-11923461 Populus trichocarpa
Potri.015G100600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11921462-11923461 Populus trichocarpa
Potri.015G100600 5.0kb upstream 5.0kb upstream 6591 true Chr15: 11914871-11921461 Populus trichocarpa
Potri.015G100600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11914871-11919870 Populus trichocarpa
Potri.015G100600 5.0kb downstream 5.0kb downstream 6591 true Chr15: 11919871-11926461 Populus trichocarpa
Potri.015G100600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11921462-11926461 Populus trichocarpa
Potri.015G100600 10.0kb upstream 10.0kb upstream 11591 true Chr15: 11909871-11921461 Populus trichocarpa
Potri.015G100600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11909871-11919870 Populus trichocarpa
Potri.015G100600 10.0kb downstream 10.0kb downstream 11591 true Chr15: 11919871-11931461 Populus trichocarpa
Potri.015G100600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11921462-11931461 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low High
cufflinks 0.018     Low  
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low High
cufflinks 0.064     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.017     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.134     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.073     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain