Gene : Potri.011G009600 P. trichocarpa v3.0
Defline:  (1 of 3) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  96
Name:  ? Potri.011G009600 Secondary Identifier:  ? PAC:27002877
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G009600 0.5kb upstream 0.5kb upstream 7920 true Chr11: 725926-733845 Populus trichocarpa
Potri.011G009600 0.5kb upstream 0.5kb upstream 500 false Chr11: 733346-733845 Populus trichocarpa
Potri.011G009600 0.5kb downstream 0.5kb downstream 7920 true Chr11: 725426-733345 Populus trichocarpa
Potri.011G009600 0.5kb downstream 0.5kb downstream 500 false Chr11: 725426-725925 Populus trichocarpa
Potri.011G009600 1.0kb upstream 1.0kb upstream 8420 true Chr11: 725926-734345 Populus trichocarpa
Potri.011G009600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 733346-734345 Populus trichocarpa
Potri.011G009600 1.0kb downstream 1.0kb downstream 8420 true Chr11: 724926-733345 Populus trichocarpa
Potri.011G009600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 724926-725925 Populus trichocarpa
Potri.011G009600 2.0kb upstream 2.0kb upstream 9420 true Chr11: 725926-735345 Populus trichocarpa
Potri.011G009600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 733346-735345 Populus trichocarpa
Potri.011G009600 2.0kb downstream 2.0kb downstream 9420 true Chr11: 723926-733345 Populus trichocarpa
Potri.011G009600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 723926-725925 Populus trichocarpa
Potri.011G009600 5.0kb upstream 5.0kb upstream 12420 true Chr11: 725926-738345 Populus trichocarpa
Potri.011G009600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 733346-738345 Populus trichocarpa
Potri.011G009600 5.0kb downstream 5.0kb downstream 12420 true Chr11: 720926-733345 Populus trichocarpa
Potri.011G009600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 720926-725925 Populus trichocarpa
Potri.011G009600 10.0kb upstream 10.0kb upstream 17420 true Chr11: 725926-743345 Populus trichocarpa
Potri.011G009600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 733346-743345 Populus trichocarpa
Potri.011G009600 10.0kb downstream 10.0kb downstream 17420 true Chr11: 715926-733345 Populus trichocarpa
Potri.011G009600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 715926-725925 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.095     Low Low
cufflinks 0.062     Low Low
cufflinks 0.206        
cufflinks 0.271        
cufflinks 0.625        
cufflinks 0.291        
cufflinks 0.15     Low  
cufflinks 0.718        
cufflinks 1.293       High
cufflinks 0.07     Low Low
cufflinks 1.005       High
cufflinks 0.795        
cufflinks 0.887       High
cufflinks 0.509        
cufflinks 0.426        
cufflinks 0.545        
cufflinks 0.118     Low Low
cufflinks 0.07     Low Low
cufflinks 0.872       High
cufflinks 0.473        
cufflinks 0.39        
cufflinks 0.226        
cufflinks 0.842        
cufflinks 0.396        
cufflinks 6.578        
cufflinks 8.749       High
cufflinks 8.655       High
cufflinks 7.656        
cufflinks 5.82        
cufflinks 8.221        

0 Strain