Gene : Potri.011G113500 P. trichocarpa v3.0
Defline:  (1 of 5) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  1135
Name:  ? Potri.011G113500 Secondary Identifier:  ? PAC:27001757
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-101 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G113500 0.5kb upstream 0.5kb upstream 1156 true Chr11: 13858970-13860125 Populus trichocarpa
Potri.011G113500 0.5kb upstream 0.5kb upstream 500 false Chr11: 13859626-13860125 Populus trichocarpa
Potri.011G113500 0.5kb downstream 0.5kb downstream 1156 true Chr11: 13858470-13859625 Populus trichocarpa
Potri.011G113500 0.5kb downstream 0.5kb downstream 500 false Chr11: 13858470-13858969 Populus trichocarpa
Potri.011G113500 1.0kb upstream 1.0kb upstream 1656 true Chr11: 13858970-13860625 Populus trichocarpa
Potri.011G113500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 13859626-13860625 Populus trichocarpa
Potri.011G113500 1.0kb downstream 1.0kb downstream 1656 true Chr11: 13857970-13859625 Populus trichocarpa
Potri.011G113500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 13857970-13858969 Populus trichocarpa
Potri.011G113500 2.0kb upstream 2.0kb upstream 2656 true Chr11: 13858970-13861625 Populus trichocarpa
Potri.011G113500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 13859626-13861625 Populus trichocarpa
Potri.011G113500 2.0kb downstream 2.0kb downstream 2656 true Chr11: 13856970-13859625 Populus trichocarpa
Potri.011G113500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 13856970-13858969 Populus trichocarpa
Potri.011G113500 5.0kb upstream 5.0kb upstream 5656 true Chr11: 13858970-13864625 Populus trichocarpa
Potri.011G113500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 13859626-13864625 Populus trichocarpa
Potri.011G113500 5.0kb downstream 5.0kb downstream 5656 true Chr11: 13853970-13859625 Populus trichocarpa
Potri.011G113500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 13853970-13858969 Populus trichocarpa
Potri.011G113500 10.0kb upstream 10.0kb upstream 10656 true Chr11: 13858970-13869625 Populus trichocarpa
Potri.011G113500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 13859626-13869625 Populus trichocarpa
Potri.011G113500 10.0kb downstream 10.0kb downstream 10656 true Chr11: 13848970-13859625 Populus trichocarpa
Potri.011G113500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 13848970-13858969 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low Low
cufflinks 0.095     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.264        
cufflinks 0.507       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.281        
cufflinks 0.149     Low  
cufflinks 0.165        
cufflinks 0.282        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  
cufflinks 0.259        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.205        
cufflinks 0.338        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain