Gene : Potri.011G052700 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21371//PTHR21371:SF1//PTHR21371:SF11 - FAMILY NOT NAMED // KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL // SUBFAMILY NOT NAMED Genomic Order:  527
Name:  ? Potri.011G052700 Secondary Identifier:  ? PAC:27002375
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G052700 0.5kb upstream 0.5kb upstream 5472 true Chr11: 4526909-4532380 Populus trichocarpa
Potri.011G052700 0.5kb upstream 0.5kb upstream 500 false Chr11: 4526909-4527408 Populus trichocarpa
Potri.011G052700 0.5kb downstream 0.5kb downstream 5472 true Chr11: 4527409-4532880 Populus trichocarpa
Potri.011G052700 0.5kb downstream 0.5kb downstream 500 false Chr11: 4532381-4532880 Populus trichocarpa
Potri.011G052700 1.0kb upstream 1.0kb upstream 5972 true Chr11: 4526409-4532380 Populus trichocarpa
Potri.011G052700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4526409-4527408 Populus trichocarpa
Potri.011G052700 1.0kb downstream 1.0kb downstream 5972 true Chr11: 4527409-4533380 Populus trichocarpa
Potri.011G052700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4532381-4533380 Populus trichocarpa
Potri.011G052700 2.0kb upstream 2.0kb upstream 6972 true Chr11: 4525409-4532380 Populus trichocarpa
Potri.011G052700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4525409-4527408 Populus trichocarpa
Potri.011G052700 2.0kb downstream 2.0kb downstream 6972 true Chr11: 4527409-4534380 Populus trichocarpa
Potri.011G052700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4532381-4534380 Populus trichocarpa
Potri.011G052700 5.0kb upstream 5.0kb upstream 9972 true Chr11: 4522409-4532380 Populus trichocarpa
Potri.011G052700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4522409-4527408 Populus trichocarpa
Potri.011G052700 5.0kb downstream 5.0kb downstream 9972 true Chr11: 4527409-4537380 Populus trichocarpa
Potri.011G052700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4532381-4537380 Populus trichocarpa
Potri.011G052700 10.0kb upstream 10.0kb upstream 14972 true Chr11: 4517409-4532380 Populus trichocarpa
Potri.011G052700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4517409-4527408 Populus trichocarpa
Potri.011G052700 10.0kb downstream 10.0kb downstream 14972 true Chr11: 4527409-4542380 Populus trichocarpa
Potri.011G052700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4532381-4542380 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.421     High  
cufflinks 35.163     High  
cufflinks 47.281     High  
cufflinks 37.556     High  
cufflinks 42.81     High  
cufflinks 23.074     High  
cufflinks 18.793     High Low
cufflinks 30.85     High  
cufflinks 25.54     High  
cufflinks 13.636     High Low
cufflinks 37.237     High  
cufflinks 22.327     High  
cufflinks 49.748     High High
cufflinks 47.794     High  
cufflinks 16.11     High Low
cufflinks 36.236     High  
cufflinks 37.588     High  
cufflinks 7.403       Low
cufflinks 47.279     High  
cufflinks 31.47     High  
cufflinks 44.708     High  
cufflinks 37.434     High  
cufflinks 38.01     High  
cufflinks 29.249     High  
cufflinks 46.273     High  
cufflinks 49.283     High  
cufflinks 46.686     High  
cufflinks 57.511     High  
cufflinks 62.054     High  
cufflinks 41.875     High  

0 Strain