Gene : Potri.012G060000 P. trichocarpa v3.0
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Genomic Order:  600
Name:  ? Potri.012G060000 Secondary Identifier:  ? PAC:27049933
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G060000 0.5kb upstream 0.5kb upstream 8804 true Chr12: 6335684-6344487 Populus trichocarpa
Potri.012G060000 0.5kb upstream 0.5kb upstream 500 false Chr12: 6335684-6336183 Populus trichocarpa
Potri.012G060000 0.5kb downstream 0.5kb downstream 8804 true Chr12: 6336184-6344987 Populus trichocarpa
Potri.012G060000 0.5kb downstream 0.5kb downstream 500 false Chr12: 6344488-6344987 Populus trichocarpa
Potri.012G060000 1.0kb upstream 1.0kb upstream 9304 true Chr12: 6335184-6344487 Populus trichocarpa
Potri.012G060000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 6335184-6336183 Populus trichocarpa
Potri.012G060000 1.0kb downstream 1.0kb downstream 9304 true Chr12: 6336184-6345487 Populus trichocarpa
Potri.012G060000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 6344488-6345487 Populus trichocarpa
Potri.012G060000 2.0kb upstream 2.0kb upstream 10304 true Chr12: 6334184-6344487 Populus trichocarpa
Potri.012G060000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 6334184-6336183 Populus trichocarpa
Potri.012G060000 2.0kb downstream 2.0kb downstream 10304 true Chr12: 6336184-6346487 Populus trichocarpa
Potri.012G060000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 6344488-6346487 Populus trichocarpa
Potri.012G060000 5.0kb upstream 5.0kb upstream 13304 true Chr12: 6331184-6344487 Populus trichocarpa
Potri.012G060000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 6331184-6336183 Populus trichocarpa
Potri.012G060000 5.0kb downstream 5.0kb downstream 13304 true Chr12: 6336184-6349487 Populus trichocarpa
Potri.012G060000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 6344488-6349487 Populus trichocarpa
Potri.012G060000 10.0kb upstream 10.0kb upstream 18304 true Chr12: 6326184-6344487 Populus trichocarpa
Potri.012G060000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 6326184-6336183 Populus trichocarpa
Potri.012G060000 10.0kb downstream 10.0kb downstream 18304 true Chr12: 6336184-6354487 Populus trichocarpa
Potri.012G060000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 6344488-6354487 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.852       Low
cufflinks 2.57        
cufflinks 2.306        
cufflinks 1.558        
cufflinks 4.57       High
cufflinks 4.555       High
cufflinks 3.933       High
cufflinks 1.839        
cufflinks 3.218        
cufflinks 4.78       High
cufflinks 2.293        
cufflinks 3.377        
cufflinks 4.641       High
cufflinks 1.818        
cufflinks 1.404        
cufflinks 3.105        
cufflinks 1.582        
cufflinks 2.179        
cufflinks 1.44        
cufflinks 0.81       Low
cufflinks 2.019        
cufflinks 3.267        
cufflinks 1.776        
cufflinks 1.13       Low
cufflinks 6.032        
cufflinks 7.126        
cufflinks 7.632        
cufflinks 10.381        
cufflinks 11.793       High
cufflinks 6.838        

0 Strain