Gene : Potri.011G100400 P. trichocarpa v3.0
Defline:  (1 of 3) 2.5.1.84 - All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) / Solanesyl-diphosphate synthase Genomic Order:  1004
Name:  ? Potri.011G100400 Secondary Identifier:  ? PAC:27002475
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5805 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5864 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G100400 0.5kb upstream 0.5kb upstream 2884 true Chr11: 12239698-12242581 Populus trichocarpa
Potri.011G100400 0.5kb upstream 0.5kb upstream 500 false Chr11: 12239698-12240197 Populus trichocarpa
Potri.011G100400 0.5kb downstream 0.5kb downstream 2884 true Chr11: 12240198-12243081 Populus trichocarpa
Potri.011G100400 0.5kb downstream 0.5kb downstream 500 false Chr11: 12242582-12243081 Populus trichocarpa
Potri.011G100400 1.0kb upstream 1.0kb upstream 3384 true Chr11: 12239198-12242581 Populus trichocarpa
Potri.011G100400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12239198-12240197 Populus trichocarpa
Potri.011G100400 1.0kb downstream 1.0kb downstream 3384 true Chr11: 12240198-12243581 Populus trichocarpa
Potri.011G100400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12242582-12243581 Populus trichocarpa
Potri.011G100400 2.0kb upstream 2.0kb upstream 4384 true Chr11: 12238198-12242581 Populus trichocarpa
Potri.011G100400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12238198-12240197 Populus trichocarpa
Potri.011G100400 2.0kb downstream 2.0kb downstream 4384 true Chr11: 12240198-12244581 Populus trichocarpa
Potri.011G100400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12242582-12244581 Populus trichocarpa
Potri.011G100400 5.0kb upstream 5.0kb upstream 7384 true Chr11: 12235198-12242581 Populus trichocarpa
Potri.011G100400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12235198-12240197 Populus trichocarpa
Potri.011G100400 5.0kb downstream 5.0kb downstream 7384 true Chr11: 12240198-12247581 Populus trichocarpa
Potri.011G100400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12242582-12247581 Populus trichocarpa
Potri.011G100400 10.0kb upstream 10.0kb upstream 12384 true Chr11: 12230198-12242581 Populus trichocarpa
Potri.011G100400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12230198-12240197 Populus trichocarpa
Potri.011G100400 10.0kb downstream 10.0kb downstream 12384 true Chr11: 12240198-12252581 Populus trichocarpa
Potri.011G100400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12242582-12252581 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain