Gene : Potri.009G131500 P. trichocarpa v3.0
Defline:  (1 of 1) K15322 - tRNA-splicing endonuclease subunit Sen2 (TSEN2) Genomic Order:  1315
Name:  ? Potri.009G131500 Secondary Identifier:  ? PAC:26986298
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6689 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G131500 0.5kb upstream 0.5kb upstream 1275 true Chr09: 10673928-10675202 Populus trichocarpa
Potri.009G131500 0.5kb upstream 0.5kb upstream 500 false Chr09: 10673928-10674427 Populus trichocarpa
Potri.009G131500 0.5kb downstream 0.5kb downstream 1275 true Chr09: 10674428-10675702 Populus trichocarpa
Potri.009G131500 0.5kb downstream 0.5kb downstream 500 false Chr09: 10675203-10675702 Populus trichocarpa
Potri.009G131500 1.0kb upstream 1.0kb upstream 1775 true Chr09: 10673428-10675202 Populus trichocarpa
Potri.009G131500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10673428-10674427 Populus trichocarpa
Potri.009G131500 1.0kb downstream 1.0kb downstream 1775 true Chr09: 10674428-10676202 Populus trichocarpa
Potri.009G131500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10675203-10676202 Populus trichocarpa
Potri.009G131500 2.0kb upstream 2.0kb upstream 2775 true Chr09: 10672428-10675202 Populus trichocarpa
Potri.009G131500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10672428-10674427 Populus trichocarpa
Potri.009G131500 2.0kb downstream 2.0kb downstream 2775 true Chr09: 10674428-10677202 Populus trichocarpa
Potri.009G131500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10675203-10677202 Populus trichocarpa
Potri.009G131500 5.0kb upstream 5.0kb upstream 5775 true Chr09: 10669428-10675202 Populus trichocarpa
Potri.009G131500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10669428-10674427 Populus trichocarpa
Potri.009G131500 5.0kb downstream 5.0kb downstream 5775 true Chr09: 10674428-10680202 Populus trichocarpa
Potri.009G131500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10675203-10680202 Populus trichocarpa
Potri.009G131500 10.0kb upstream 10.0kb upstream 10775 true Chr09: 10664428-10675202 Populus trichocarpa
Potri.009G131500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10664428-10674427 Populus trichocarpa
Potri.009G131500 10.0kb downstream 10.0kb downstream 10775 true Chr09: 10674428-10685202 Populus trichocarpa
Potri.009G131500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10675203-10685202 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.117        
cufflinks 4.064       Low
cufflinks 9.063       High
cufflinks 7.164        
cufflinks 8.794       High
cufflinks 4.669        
cufflinks 4.845        
cufflinks 8.062       High
cufflinks 5.451        
cufflinks 5.394        
cufflinks 4.654        
cufflinks 4.785        
cufflinks 4.553        
cufflinks 5.796        
cufflinks 4.253       Low
cufflinks 5.798        
cufflinks 8.068       High
cufflinks 2.935       Low
cufflinks 7.114        
cufflinks 5.626        
cufflinks 6.662        
cufflinks 6.255        
cufflinks 5.185        
cufflinks 7.287        
cufflinks 5.288        
cufflinks 8.433        
cufflinks 8.693        
cufflinks 7.711        
cufflinks 8.093        
cufflinks 4.517        

0 Strain