Gene : Potri.012G068600 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR12843//PTHR12843:SF5 - UNCHARACTERIZED // METHYLTRANSFERASE-LIKE PROTEIN 10 Genomic Order:  686
Name:  ? Potri.012G068600 Secondary Identifier:  ? PAC:27050103
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5872 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5871 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G068600 0.5kb upstream 0.5kb upstream 5696 true Chr12: 9116082-9121777 Populus trichocarpa
Potri.012G068600 0.5kb upstream 0.5kb upstream 500 false Chr12: 9116082-9116581 Populus trichocarpa
Potri.012G068600 0.5kb downstream 0.5kb downstream 5696 true Chr12: 9116582-9122277 Populus trichocarpa
Potri.012G068600 0.5kb downstream 0.5kb downstream 500 false Chr12: 9121778-9122277 Populus trichocarpa
Potri.012G068600 1.0kb upstream 1.0kb upstream 6196 true Chr12: 9115582-9121777 Populus trichocarpa
Potri.012G068600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9115582-9116581 Populus trichocarpa
Potri.012G068600 1.0kb downstream 1.0kb downstream 6196 true Chr12: 9116582-9122777 Populus trichocarpa
Potri.012G068600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9121778-9122777 Populus trichocarpa
Potri.012G068600 2.0kb upstream 2.0kb upstream 7196 true Chr12: 9114582-9121777 Populus trichocarpa
Potri.012G068600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9114582-9116581 Populus trichocarpa
Potri.012G068600 2.0kb downstream 2.0kb downstream 7196 true Chr12: 9116582-9123777 Populus trichocarpa
Potri.012G068600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9121778-9123777 Populus trichocarpa
Potri.012G068600 5.0kb upstream 5.0kb upstream 10196 true Chr12: 9111582-9121777 Populus trichocarpa
Potri.012G068600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9111582-9116581 Populus trichocarpa
Potri.012G068600 5.0kb downstream 5.0kb downstream 10196 true Chr12: 9116582-9126777 Populus trichocarpa
Potri.012G068600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9121778-9126777 Populus trichocarpa
Potri.012G068600 10.0kb upstream 10.0kb upstream 15196 true Chr12: 9106582-9121777 Populus trichocarpa
Potri.012G068600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9106582-9116581 Populus trichocarpa
Potri.012G068600 10.0kb downstream 10.0kb downstream 15196 true Chr12: 9116582-9131777 Populus trichocarpa
Potri.012G068600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9121778-9131777 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low Low
cufflinks 0.051     Low Low
cufflinks 0.052     Low Low
cufflinks 0.201        
cufflinks 0.269        
cufflinks 0.154        
cufflinks 0.093     Low  
cufflinks 0.129        
cufflinks 0.248        
cufflinks 0.209        
cufflinks 0.615       High
cufflinks 0.037     Low Low
cufflinks 0.467       High
cufflinks 0.466       High
cufflinks 0.171        
cufflinks 0.066     Low Low
cufflinks 0.149     Low  
cufflinks 0.105     Low  
cufflinks 0.469       High
cufflinks 0.235        
cufflinks 0.405       High
cufflinks 0.163        
cufflinks 0.181        
cufflinks 8.63        
cufflinks 8.152        
cufflinks 9.105       High
cufflinks 9.818       High
cufflinks 7.316        
cufflinks 8.198        

0 Strain