Gene : Potri.012G107500 P. trichocarpa v3.0
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Genomic Order:  1075
Name:  ? Potri.012G107500 Secondary Identifier:  ? PAC:27051215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6121 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6613 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G107500 0.5kb upstream 0.5kb upstream 4551 true Chr12: 13108143-13112693 Populus trichocarpa
Potri.012G107500 0.5kb upstream 0.5kb upstream 500 false Chr12: 13108143-13108642 Populus trichocarpa
Potri.012G107500 0.5kb downstream 0.5kb downstream 4551 true Chr12: 13108643-13113193 Populus trichocarpa
Potri.012G107500 0.5kb downstream 0.5kb downstream 500 false Chr12: 13112694-13113193 Populus trichocarpa
Potri.012G107500 1.0kb upstream 1.0kb upstream 5051 true Chr12: 13107643-13112693 Populus trichocarpa
Potri.012G107500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 13107643-13108642 Populus trichocarpa
Potri.012G107500 1.0kb downstream 1.0kb downstream 5051 true Chr12: 13108643-13113693 Populus trichocarpa
Potri.012G107500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 13112694-13113693 Populus trichocarpa
Potri.012G107500 2.0kb upstream 2.0kb upstream 6051 true Chr12: 13106643-13112693 Populus trichocarpa
Potri.012G107500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 13106643-13108642 Populus trichocarpa
Potri.012G107500 2.0kb downstream 2.0kb downstream 6051 true Chr12: 13108643-13114693 Populus trichocarpa
Potri.012G107500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 13112694-13114693 Populus trichocarpa
Potri.012G107500 5.0kb upstream 5.0kb upstream 9051 true Chr12: 13103643-13112693 Populus trichocarpa
Potri.012G107500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 13103643-13108642 Populus trichocarpa
Potri.012G107500 5.0kb downstream 5.0kb downstream 9051 true Chr12: 13108643-13117693 Populus trichocarpa
Potri.012G107500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 13112694-13117693 Populus trichocarpa
Potri.012G107500 10.0kb upstream 10.0kb upstream 14051 true Chr12: 13098643-13112693 Populus trichocarpa
Potri.012G107500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 13098643-13108642 Populus trichocarpa
Potri.012G107500 10.0kb downstream 10.0kb downstream 14051 true Chr12: 13108643-13122693 Populus trichocarpa
Potri.012G107500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 13112694-13122693 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.354       Low
cufflinks 1.747        
cufflinks 2.602       High
cufflinks 1.834        
cufflinks 2.087        
cufflinks 1.827        
cufflinks 2.163        
cufflinks 2.444       High
cufflinks 1.732        
cufflinks 2.061        
cufflinks 2.409        
cufflinks 2.887       High
cufflinks 1.508       Low
cufflinks 2.75       High
cufflinks 1.922        
cufflinks 2.219        
cufflinks 1.227       Low
cufflinks 1.933        
cufflinks 1.971        
cufflinks 1.673        
cufflinks 1.717        
cufflinks 1.925        
cufflinks 2.254        
cufflinks 2.081        
cufflinks 6.69        
cufflinks 7.092        
cufflinks 7.714        
cufflinks 9.189       High
cufflinks 7.264        
cufflinks 6.854        

0 Strain