Gene : Potri.012G062600 P. trichocarpa v3.0
Defline:  (1 of 3) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL) Genomic Order:  626
Name:  ? Potri.012G062600 Secondary Identifier:  ? PAC:27048858
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5723 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G062600 0.5kb upstream 0.5kb upstream 2199 true Chr12: 7085735-7087933 Populus trichocarpa
Potri.012G062600 0.5kb upstream 0.5kb upstream 500 false Chr12: 7085735-7086234 Populus trichocarpa
Potri.012G062600 0.5kb downstream 0.5kb downstream 2199 true Chr12: 7086235-7088433 Populus trichocarpa
Potri.012G062600 0.5kb downstream 0.5kb downstream 500 false Chr12: 7087934-7088433 Populus trichocarpa
Potri.012G062600 1.0kb upstream 1.0kb upstream 2699 true Chr12: 7085235-7087933 Populus trichocarpa
Potri.012G062600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7085235-7086234 Populus trichocarpa
Potri.012G062600 1.0kb downstream 1.0kb downstream 2699 true Chr12: 7086235-7088933 Populus trichocarpa
Potri.012G062600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7087934-7088933 Populus trichocarpa
Potri.012G062600 2.0kb upstream 2.0kb upstream 3699 true Chr12: 7084235-7087933 Populus trichocarpa
Potri.012G062600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7084235-7086234 Populus trichocarpa
Potri.012G062600 2.0kb downstream 2.0kb downstream 3699 true Chr12: 7086235-7089933 Populus trichocarpa
Potri.012G062600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7087934-7089933 Populus trichocarpa
Potri.012G062600 5.0kb upstream 5.0kb upstream 6699 true Chr12: 7081235-7087933 Populus trichocarpa
Potri.012G062600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7081235-7086234 Populus trichocarpa
Potri.012G062600 5.0kb downstream 5.0kb downstream 6699 true Chr12: 7086235-7092933 Populus trichocarpa
Potri.012G062600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7087934-7092933 Populus trichocarpa
Potri.012G062600 10.0kb upstream 10.0kb upstream 11699 true Chr12: 7076235-7087933 Populus trichocarpa
Potri.012G062600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7076235-7086234 Populus trichocarpa
Potri.012G062600 10.0kb downstream 10.0kb downstream 11699 true Chr12: 7086235-7097933 Populus trichocarpa
Potri.012G062600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7087934-7097933 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.418       High
cufflinks 0.037     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.855        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.802        
cufflinks 0.331        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low Low
cufflinks 0.195        
cufflinks 0.122     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low Low
cufflinks 0.776        
cufflinks 0.226        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.035       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain