Gene : Potri.012G080900 P. trichocarpa v3.0
Defline:  (1 of 2) K00099 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase (dxr) Genomic Order:  809
Name:  ? Potri.012G080900 Secondary Identifier:  ? PAC:27051162
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G080900 0.5kb upstream 0.5kb upstream 6367 true Chr12: 10715238-10721604 Populus trichocarpa
Potri.012G080900 0.5kb upstream 0.5kb upstream 500 false Chr12: 10715238-10715737 Populus trichocarpa
Potri.012G080900 0.5kb downstream 0.5kb downstream 6367 true Chr12: 10715738-10722104 Populus trichocarpa
Potri.012G080900 0.5kb downstream 0.5kb downstream 500 false Chr12: 10721605-10722104 Populus trichocarpa
Potri.012G080900 1.0kb upstream 1.0kb upstream 6867 true Chr12: 10714738-10721604 Populus trichocarpa
Potri.012G080900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10714738-10715737 Populus trichocarpa
Potri.012G080900 1.0kb downstream 1.0kb downstream 6867 true Chr12: 10715738-10722604 Populus trichocarpa
Potri.012G080900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10721605-10722604 Populus trichocarpa
Potri.012G080900 2.0kb upstream 2.0kb upstream 7867 true Chr12: 10713738-10721604 Populus trichocarpa
Potri.012G080900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10713738-10715737 Populus trichocarpa
Potri.012G080900 2.0kb downstream 2.0kb downstream 7867 true Chr12: 10715738-10723604 Populus trichocarpa
Potri.012G080900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10721605-10723604 Populus trichocarpa
Potri.012G080900 5.0kb upstream 5.0kb upstream 10867 true Chr12: 10710738-10721604 Populus trichocarpa
Potri.012G080900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10710738-10715737 Populus trichocarpa
Potri.012G080900 5.0kb downstream 5.0kb downstream 10867 true Chr12: 10715738-10726604 Populus trichocarpa
Potri.012G080900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10721605-10726604 Populus trichocarpa
Potri.012G080900 10.0kb upstream 10.0kb upstream 15867 true Chr12: 10705738-10721604 Populus trichocarpa
Potri.012G080900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10705738-10715737 Populus trichocarpa
Potri.012G080900 10.0kb downstream 10.0kb downstream 15867 true Chr12: 10715738-10731604 Populus trichocarpa
Potri.012G080900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10721605-10731604 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.477       Low
cufflinks 4.362       High
cufflinks 2.192        
cufflinks 3.349        
cufflinks 3.805        
cufflinks 3.303        
cufflinks 3.629        
cufflinks 3.23        
cufflinks 2.705        
cufflinks 3.117        
cufflinks 2.267        
cufflinks 5.011       High
cufflinks 3.748        
cufflinks 2.753        
cufflinks 1.445       Low
cufflinks 2.628        
cufflinks 1.619       Low
cufflinks 1.656       Low
cufflinks 2.589        
cufflinks 2.893        
cufflinks 3.674        
cufflinks 7.445       High
cufflinks 3.174        
cufflinks 3.703        
cufflinks 18.07        
cufflinks 30.178     High  
cufflinks 37.734     High High
cufflinks 29.341     High  
cufflinks 34.809     High High
cufflinks 27.471     High  

0 Strain