Gene : Potri.012G098300 P. trichocarpa v3.0
Defline:  (1 of 2) K01652 - acetolactate synthase I/II/III large subunit (E2.2.1.6L, ilvB, ilvG, ilvI) Genomic Order:  983
Name:  ? Potri.012G098300 Secondary Identifier:  ? PAC:27050794
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.012G098300 0.5kb upstream 0.5kb upstream 2724 true Chr12: 12415253-12417976 Populus trichocarpa
Potri.012G098300 0.5kb upstream 0.5kb upstream 500 false Chr12: 12417477-12417976 Populus trichocarpa
Potri.012G098300 0.5kb downstream 0.5kb downstream 2724 true Chr12: 12414753-12417476 Populus trichocarpa
Potri.012G098300 0.5kb downstream 0.5kb downstream 500 false Chr12: 12414753-12415252 Populus trichocarpa
Potri.012G098300 1.0kb upstream 1.0kb upstream 3224 true Chr12: 12415253-12418476 Populus trichocarpa
Potri.012G098300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 12417477-12418476 Populus trichocarpa
Potri.012G098300 1.0kb downstream 1.0kb downstream 3224 true Chr12: 12414253-12417476 Populus trichocarpa
Potri.012G098300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 12414253-12415252 Populus trichocarpa
Potri.012G098300 2.0kb upstream 2.0kb upstream 4224 true Chr12: 12415253-12419476 Populus trichocarpa
Potri.012G098300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 12417477-12419476 Populus trichocarpa
Potri.012G098300 2.0kb downstream 2.0kb downstream 4224 true Chr12: 12413253-12417476 Populus trichocarpa
Potri.012G098300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 12413253-12415252 Populus trichocarpa
Potri.012G098300 5.0kb upstream 5.0kb upstream 7224 true Chr12: 12415253-12422476 Populus trichocarpa
Potri.012G098300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 12417477-12422476 Populus trichocarpa
Potri.012G098300 5.0kb downstream 5.0kb downstream 7224 true Chr12: 12410253-12417476 Populus trichocarpa
Potri.012G098300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 12410253-12415252 Populus trichocarpa
Potri.012G098300 10.0kb upstream 10.0kb upstream 12224 true Chr12: 12415253-12427476 Populus trichocarpa
Potri.012G098300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 12417477-12427476 Populus trichocarpa
Potri.012G098300 10.0kb downstream 10.0kb downstream 12224 true Chr12: 12405253-12417476 Populus trichocarpa
Potri.012G098300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 12405253-12415252 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.669        
cufflinks 12.998        
cufflinks 14.206     High  
cufflinks 22.748     High High
cufflinks 15.969     High  
cufflinks 7.044        
cufflinks 3.843       Low
cufflinks 16.275     High  
cufflinks 17.217     High  
cufflinks 8.642     High  
cufflinks 5.704       Low
cufflinks 4.04       Low
cufflinks 15.797     High  
cufflinks 5.557       Low
cufflinks 21.421     High High
cufflinks 13.555     High  
cufflinks 22.63     High High
cufflinks 8.705     High  
cufflinks 16.821     High  
cufflinks 8.984        
cufflinks 13.669     High  
cufflinks 10.314     High  
cufflinks 18.463     High  
cufflinks 17.206     High  
cufflinks 12.791     High  
cufflinks 18.607     High  
cufflinks 4.456        
cufflinks 6.639        
cufflinks 7.973        
cufflinks 13.419        

0 Strain