Gene : Potri.013G099500 P. trichocarpa v3.0
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  995
Name:  ? Potri.013G099500 Secondary Identifier:  ? PAC:26995097
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HOMOSERSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  
Ptrichocarpa THRESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G099500 0.5kb upstream 0.5kb upstream 10110 true Chr13: 10925703-10935812 Populus trichocarpa
Potri.013G099500 0.5kb upstream 0.5kb upstream 500 false Chr13: 10925703-10926202 Populus trichocarpa
Potri.013G099500 0.5kb downstream 0.5kb downstream 10110 true Chr13: 10926203-10936312 Populus trichocarpa
Potri.013G099500 0.5kb downstream 0.5kb downstream 500 false Chr13: 10935813-10936312 Populus trichocarpa
Potri.013G099500 1.0kb upstream 1.0kb upstream 10610 true Chr13: 10925203-10935812 Populus trichocarpa
Potri.013G099500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10925203-10926202 Populus trichocarpa
Potri.013G099500 1.0kb downstream 1.0kb downstream 10610 true Chr13: 10926203-10936812 Populus trichocarpa
Potri.013G099500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10935813-10936812 Populus trichocarpa
Potri.013G099500 2.0kb upstream 2.0kb upstream 11610 true Chr13: 10924203-10935812 Populus trichocarpa
Potri.013G099500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10924203-10926202 Populus trichocarpa
Potri.013G099500 2.0kb downstream 2.0kb downstream 11610 true Chr13: 10926203-10937812 Populus trichocarpa
Potri.013G099500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10935813-10937812 Populus trichocarpa
Potri.013G099500 5.0kb upstream 5.0kb upstream 14610 true Chr13: 10921203-10935812 Populus trichocarpa
Potri.013G099500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10921203-10926202 Populus trichocarpa
Potri.013G099500 5.0kb downstream 5.0kb downstream 14610 true Chr13: 10926203-10940812 Populus trichocarpa
Potri.013G099500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10935813-10940812 Populus trichocarpa
Potri.013G099500 10.0kb upstream 10.0kb upstream 19610 true Chr13: 10916203-10935812 Populus trichocarpa
Potri.013G099500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10916203-10926202 Populus trichocarpa
Potri.013G099500 10.0kb downstream 10.0kb downstream 19610 true Chr13: 10926203-10945812 Populus trichocarpa
Potri.013G099500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10935813-10945812 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.48        
cufflinks 0.848        
cufflinks 1.144        
cufflinks 0.445        
cufflinks 0.521        
cufflinks 1.304        
cufflinks 0.378        
cufflinks 0.43        
cufflinks 0.698        
cufflinks 0.98        
cufflinks 1.354        
cufflinks 0.985        
cufflinks 1.061        
cufflinks 0.38        
cufflinks 2.335       High
cufflinks 0.873        
cufflinks 1.861       High
cufflinks 0.51        
cufflinks 1.574       High
cufflinks 0.203       Low
cufflinks 0.262       Low
cufflinks 0.259       Low
cufflinks 0.42        
cufflinks 0.882        
cufflinks 0.692        
cufflinks 1.407       High
cufflinks 0.298     Low  
cufflinks 1.998        
cufflinks 1.43        
cufflinks 3.632       High

0 Strain