Gene : Potri.013G113900 P. trichocarpa v3.0
Defline:  (1 of 1) 2.6.1.9 - Histidinol-phosphate transaminase / Imidazolylacetolphosphate aminotransferase Genomic Order:  1139
Name:  ? Potri.013G113900 Secondary Identifier:  ? PAC:26995175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa HISTSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G113900 0.5kb upstream 0.5kb upstream 6787 true Chr13: 12704592-12711378 Populus trichocarpa
Potri.013G113900 0.5kb upstream 0.5kb upstream 500 false Chr13: 12710879-12711378 Populus trichocarpa
Potri.013G113900 0.5kb downstream 0.5kb downstream 6787 true Chr13: 12704092-12710878 Populus trichocarpa
Potri.013G113900 0.5kb downstream 0.5kb downstream 500 false Chr13: 12704092-12704591 Populus trichocarpa
Potri.013G113900 1.0kb upstream 1.0kb upstream 7287 true Chr13: 12704592-12711878 Populus trichocarpa
Potri.013G113900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 12710879-12711878 Populus trichocarpa
Potri.013G113900 1.0kb downstream 1.0kb downstream 7287 true Chr13: 12703592-12710878 Populus trichocarpa
Potri.013G113900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 12703592-12704591 Populus trichocarpa
Potri.013G113900 2.0kb upstream 2.0kb upstream 8287 true Chr13: 12704592-12712878 Populus trichocarpa
Potri.013G113900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 12710879-12712878 Populus trichocarpa
Potri.013G113900 2.0kb downstream 2.0kb downstream 8287 true Chr13: 12702592-12710878 Populus trichocarpa
Potri.013G113900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 12702592-12704591 Populus trichocarpa
Potri.013G113900 5.0kb upstream 5.0kb upstream 11287 true Chr13: 12704592-12715878 Populus trichocarpa
Potri.013G113900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 12710879-12715878 Populus trichocarpa
Potri.013G113900 5.0kb downstream 5.0kb downstream 11287 true Chr13: 12699592-12710878 Populus trichocarpa
Potri.013G113900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 12699592-12704591 Populus trichocarpa
Potri.013G113900 10.0kb upstream 10.0kb upstream 16287 true Chr13: 12704592-12720878 Populus trichocarpa
Potri.013G113900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 12710879-12720878 Populus trichocarpa
Potri.013G113900 10.0kb downstream 10.0kb downstream 16287 true Chr13: 12694592-12710878 Populus trichocarpa
Potri.013G113900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 12694592-12704591 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.096       Low
cufflinks 3.041        
cufflinks 2.759        
cufflinks 2.885        
cufflinks 2.504        
cufflinks 2.344        
cufflinks 1.907        
cufflinks 1.665       Low
cufflinks 2.89        
cufflinks 2.838        
cufflinks 3.601       High
cufflinks 2.438        
cufflinks 3.509       High
cufflinks 2.402        
cufflinks 3.608       High
cufflinks 2.927        
cufflinks 0.918       Low
cufflinks 2.838        
cufflinks 3.324        
cufflinks 1.622       Low
cufflinks 2.943        
cufflinks 1.708        
cufflinks 2.687        
cufflinks 3.434        
cufflinks 17.824        
cufflinks 17.711        
cufflinks 20.366        
cufflinks 19.292        
cufflinks 23.655       High
cufflinks 16.352        

0 Strain