Gene : Potri.013G024000 P. trichocarpa v3.0
Defline:  (1 of 2) K00869 - mevalonate kinase (E2.7.1.36, MVK, mvaK1) Genomic Order:  240
Name:  ? Potri.013G024000 Secondary Identifier:  ? PAC:26993660
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-922 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5910 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G024000 0.5kb upstream 0.5kb upstream 4317 true Chr13: 1561008-1565324 Populus trichocarpa
Potri.013G024000 0.5kb upstream 0.5kb upstream 500 false Chr13: 1564825-1565324 Populus trichocarpa
Potri.013G024000 0.5kb downstream 0.5kb downstream 4317 true Chr13: 1560508-1564824 Populus trichocarpa
Potri.013G024000 0.5kb downstream 0.5kb downstream 500 false Chr13: 1560508-1561007 Populus trichocarpa
Potri.013G024000 1.0kb upstream 1.0kb upstream 4817 true Chr13: 1561008-1565824 Populus trichocarpa
Potri.013G024000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1564825-1565824 Populus trichocarpa
Potri.013G024000 1.0kb downstream 1.0kb downstream 4817 true Chr13: 1560008-1564824 Populus trichocarpa
Potri.013G024000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1560008-1561007 Populus trichocarpa
Potri.013G024000 2.0kb upstream 2.0kb upstream 5817 true Chr13: 1561008-1566824 Populus trichocarpa
Potri.013G024000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1564825-1566824 Populus trichocarpa
Potri.013G024000 2.0kb downstream 2.0kb downstream 5817 true Chr13: 1559008-1564824 Populus trichocarpa
Potri.013G024000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1559008-1561007 Populus trichocarpa
Potri.013G024000 5.0kb upstream 5.0kb upstream 8817 true Chr13: 1561008-1569824 Populus trichocarpa
Potri.013G024000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1564825-1569824 Populus trichocarpa
Potri.013G024000 5.0kb downstream 5.0kb downstream 8817 true Chr13: 1556008-1564824 Populus trichocarpa
Potri.013G024000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1556008-1561007 Populus trichocarpa
Potri.013G024000 10.0kb upstream 10.0kb upstream 13817 true Chr13: 1561008-1574824 Populus trichocarpa
Potri.013G024000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1564825-1574824 Populus trichocarpa
Potri.013G024000 10.0kb downstream 10.0kb downstream 13817 true Chr13: 1551008-1564824 Populus trichocarpa
Potri.013G024000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1551008-1561007 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.857     High  
cufflinks 7.5       Low
cufflinks 4.984       Low
cufflinks 14.343     High  
cufflinks 10.806     High  
cufflinks 13.699     High  
cufflinks 22.138     High High
cufflinks 14.103     High  
cufflinks 10.598     High  
cufflinks 12.086     High  
cufflinks 23.635     High High
cufflinks 14.859     High  
cufflinks 13.566     High  
cufflinks 13.393     High  
cufflinks 8.54        
cufflinks 24.471     High High
cufflinks 6.992       Low
cufflinks 6.423       Low
cufflinks 16.513     High  
cufflinks 7.219       Low
cufflinks 14.032     High  
cufflinks 12.347     High  
cufflinks 11.117     High  
cufflinks 16.104     High  
cufflinks 11.268        
cufflinks 10.611        
cufflinks 6.628        
cufflinks 10.431        
cufflinks 14.072       High
cufflinks 6.199        

0 Strain