Gene : Potri.013G068100 P. trichocarpa v3.0
Defline:  (1 of 2) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT) Genomic Order:  681
Name:  ? Potri.013G068100 Secondary Identifier:  ? PAC:26994101
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G068100 0.5kb upstream 0.5kb upstream 10589 true Chr13: 5472179-5482767 Populus trichocarpa
Potri.013G068100 0.5kb upstream 0.5kb upstream 500 false Chr13: 5472179-5472678 Populus trichocarpa
Potri.013G068100 0.5kb downstream 0.5kb downstream 10589 true Chr13: 5472679-5483267 Populus trichocarpa
Potri.013G068100 0.5kb downstream 0.5kb downstream 500 false Chr13: 5482768-5483267 Populus trichocarpa
Potri.013G068100 1.0kb upstream 1.0kb upstream 11089 true Chr13: 5471679-5482767 Populus trichocarpa
Potri.013G068100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 5471679-5472678 Populus trichocarpa
Potri.013G068100 1.0kb downstream 1.0kb downstream 11089 true Chr13: 5472679-5483767 Populus trichocarpa
Potri.013G068100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 5482768-5483767 Populus trichocarpa
Potri.013G068100 2.0kb upstream 2.0kb upstream 12089 true Chr13: 5470679-5482767 Populus trichocarpa
Potri.013G068100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 5470679-5472678 Populus trichocarpa
Potri.013G068100 2.0kb downstream 2.0kb downstream 12089 true Chr13: 5472679-5484767 Populus trichocarpa
Potri.013G068100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 5482768-5484767 Populus trichocarpa
Potri.013G068100 5.0kb upstream 5.0kb upstream 15089 true Chr13: 5467679-5482767 Populus trichocarpa
Potri.013G068100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 5467679-5472678 Populus trichocarpa
Potri.013G068100 5.0kb downstream 5.0kb downstream 15089 true Chr13: 5472679-5487767 Populus trichocarpa
Potri.013G068100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 5482768-5487767 Populus trichocarpa
Potri.013G068100 10.0kb upstream 10.0kb upstream 20089 true Chr13: 5462679-5482767 Populus trichocarpa
Potri.013G068100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 5462679-5472678 Populus trichocarpa
Potri.013G068100 10.0kb downstream 10.0kb downstream 20089 true Chr13: 5472679-5492767 Populus trichocarpa
Potri.013G068100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 5482768-5492767 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.562        
cufflinks 2.358        
cufflinks 4.643       High
cufflinks 1.642       Low
cufflinks 2.274       Low
cufflinks 3.301        
cufflinks 4.154        
cufflinks 4.318       High
cufflinks 3.987        
cufflinks 2.606        
cufflinks 2.77        
cufflinks 2.849        
cufflinks 3.886        
cufflinks 3.65        
cufflinks 2.13       Low
cufflinks 5.268       High
cufflinks 4.694       High
cufflinks 3.446        
cufflinks 2.783        
cufflinks 2.06       Low
cufflinks 3.254        
cufflinks 2.39        
cufflinks 3.354        
cufflinks 3.171        
cufflinks 31.051     High  
cufflinks 22.208       Low
cufflinks 21.336       Low
cufflinks 26.014        
cufflinks 26.918        
cufflinks 31.044     High  

0 Strain