Gene : Potri.013G046300 P. trichocarpa v3.0
Defline:  (1 of 2) K12860 - pre-mRNA-splicing factor CDC5/CEF1 (CDC5L, CDC5, CEF1) Genomic Order:  463
Name:  ? Potri.013G046300 Secondary Identifier:  ? PAC:26993616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G046300 0.5kb upstream 0.5kb upstream 8199 true Chr13: 3321030-3329228 Populus trichocarpa
Potri.013G046300 0.5kb upstream 0.5kb upstream 500 false Chr13: 3321030-3321529 Populus trichocarpa
Potri.013G046300 0.5kb downstream 0.5kb downstream 8199 true Chr13: 3321530-3329728 Populus trichocarpa
Potri.013G046300 0.5kb downstream 0.5kb downstream 500 false Chr13: 3329229-3329728 Populus trichocarpa
Potri.013G046300 1.0kb upstream 1.0kb upstream 8699 true Chr13: 3320530-3329228 Populus trichocarpa
Potri.013G046300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 3320530-3321529 Populus trichocarpa
Potri.013G046300 1.0kb downstream 1.0kb downstream 8699 true Chr13: 3321530-3330228 Populus trichocarpa
Potri.013G046300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 3329229-3330228 Populus trichocarpa
Potri.013G046300 2.0kb upstream 2.0kb upstream 9699 true Chr13: 3319530-3329228 Populus trichocarpa
Potri.013G046300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 3319530-3321529 Populus trichocarpa
Potri.013G046300 2.0kb downstream 2.0kb downstream 9699 true Chr13: 3321530-3331228 Populus trichocarpa
Potri.013G046300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 3329229-3331228 Populus trichocarpa
Potri.013G046300 5.0kb upstream 5.0kb upstream 12699 true Chr13: 3316530-3329228 Populus trichocarpa
Potri.013G046300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 3316530-3321529 Populus trichocarpa
Potri.013G046300 5.0kb downstream 5.0kb downstream 12699 true Chr13: 3321530-3334228 Populus trichocarpa
Potri.013G046300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 3329229-3334228 Populus trichocarpa
Potri.013G046300 10.0kb upstream 10.0kb upstream 17699 true Chr13: 3311530-3329228 Populus trichocarpa
Potri.013G046300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 3311530-3321529 Populus trichocarpa
Potri.013G046300 10.0kb downstream 10.0kb downstream 17699 true Chr13: 3321530-3339228 Populus trichocarpa
Potri.013G046300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 3329229-3339228 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.157       Low
cufflinks 2.362        
cufflinks 2.724       High
cufflinks 1.138       Low
cufflinks 2.282        
cufflinks 1.5        
cufflinks 3.217       High
cufflinks 1.944        
cufflinks 1.189       Low
cufflinks 1.894        
cufflinks 1.57        
cufflinks 1.623        
cufflinks 1.453        
cufflinks 2.464        
cufflinks 1.636        
cufflinks 2.426        
cufflinks 1.198       Low
cufflinks 1.281        
cufflinks 1.409        
cufflinks 3.136       High
cufflinks 0.904       Low
cufflinks 2.491       High
cufflinks 2.025        
cufflinks 1.696        
cufflinks 11.264        
cufflinks 14.055        
cufflinks 14.626        
cufflinks 14.942       High
cufflinks 15.426       High
cufflinks 12.661        

0 Strain