Gene : Potri.013G070500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED Genomic Order:  705
Name:  ? Potri.013G070500 Secondary Identifier:  ? PAC:26993428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G070500 0.5kb upstream 0.5kb upstream 5253 true Chr13: 5888857-5894109 Populus trichocarpa
Potri.013G070500 0.5kb upstream 0.5kb upstream 500 false Chr13: 5893610-5894109 Populus trichocarpa
Potri.013G070500 0.5kb downstream 0.5kb downstream 5253 true Chr13: 5888357-5893609 Populus trichocarpa
Potri.013G070500 0.5kb downstream 0.5kb downstream 500 false Chr13: 5888357-5888856 Populus trichocarpa
Potri.013G070500 1.0kb upstream 1.0kb upstream 5753 true Chr13: 5888857-5894609 Populus trichocarpa
Potri.013G070500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 5893610-5894609 Populus trichocarpa
Potri.013G070500 1.0kb downstream 1.0kb downstream 5753 true Chr13: 5887857-5893609 Populus trichocarpa
Potri.013G070500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 5887857-5888856 Populus trichocarpa
Potri.013G070500 2.0kb upstream 2.0kb upstream 6753 true Chr13: 5888857-5895609 Populus trichocarpa
Potri.013G070500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 5893610-5895609 Populus trichocarpa
Potri.013G070500 2.0kb downstream 2.0kb downstream 6753 true Chr13: 5886857-5893609 Populus trichocarpa
Potri.013G070500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 5886857-5888856 Populus trichocarpa
Potri.013G070500 5.0kb upstream 5.0kb upstream 9753 true Chr13: 5888857-5898609 Populus trichocarpa
Potri.013G070500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 5893610-5898609 Populus trichocarpa
Potri.013G070500 5.0kb downstream 5.0kb downstream 9753 true Chr13: 5883857-5893609 Populus trichocarpa
Potri.013G070500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 5883857-5888856 Populus trichocarpa
Potri.013G070500 10.0kb upstream 10.0kb upstream 14753 true Chr13: 5888857-5903609 Populus trichocarpa
Potri.013G070500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 5893610-5903609 Populus trichocarpa
Potri.013G070500 10.0kb downstream 10.0kb downstream 14753 true Chr13: 5878857-5893609 Populus trichocarpa
Potri.013G070500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 5878857-5888856 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.366        
cufflinks 8.479     High  
cufflinks 1.576        
cufflinks 16.757     High  
cufflinks 36.776     High High
cufflinks 0.461       Low
cufflinks 1.541        
cufflinks 22.768     High High
cufflinks 2.739        
cufflinks 5.073        
cufflinks 8.828     High  
cufflinks 1.59        
cufflinks 0.401       Low
cufflinks 21.957     High High
cufflinks 19.916     High High
cufflinks 6.497        
cufflinks 0.456       Low
cufflinks 3.132        
cufflinks 8.269        
cufflinks 3.054        
cufflinks 0.328       Low
cufflinks 1.463        
cufflinks 13.886     High  
cufflinks 11.776     High  
cufflinks 8.083        
cufflinks 9.171        
cufflinks 11.988        
cufflinks 11.168        
cufflinks 7.99        
cufflinks 11.548        

0 Strain