Gene : Potri.016G008000 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR15601//PTHR15601:SF4 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 // SUBFAMILY NOT NAMED Genomic Order:  80
Name:  ? Potri.016G008000 Secondary Identifier:  ? PAC:27012263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G008000 0.5kb upstream 0.5kb upstream 1196 true Chr16: 387691-388886 Populus trichocarpa
Potri.016G008000 0.5kb upstream 0.5kb upstream 500 false Chr16: 388387-388886 Populus trichocarpa
Potri.016G008000 0.5kb downstream 0.5kb downstream 1196 true Chr16: 387191-388386 Populus trichocarpa
Potri.016G008000 0.5kb downstream 0.5kb downstream 500 false Chr16: 387191-387690 Populus trichocarpa
Potri.016G008000 1.0kb upstream 1.0kb upstream 1696 true Chr16: 387691-389386 Populus trichocarpa
Potri.016G008000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 388387-389386 Populus trichocarpa
Potri.016G008000 1.0kb downstream 1.0kb downstream 1696 true Chr16: 386691-388386 Populus trichocarpa
Potri.016G008000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 386691-387690 Populus trichocarpa
Potri.016G008000 2.0kb upstream 2.0kb upstream 2696 true Chr16: 387691-390386 Populus trichocarpa
Potri.016G008000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 388387-390386 Populus trichocarpa
Potri.016G008000 2.0kb downstream 2.0kb downstream 2696 true Chr16: 385691-388386 Populus trichocarpa
Potri.016G008000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 385691-387690 Populus trichocarpa
Potri.016G008000 5.0kb upstream 5.0kb upstream 5696 true Chr16: 387691-393386 Populus trichocarpa
Potri.016G008000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 388387-393386 Populus trichocarpa
Potri.016G008000 5.0kb downstream 5.0kb downstream 5696 true Chr16: 382691-388386 Populus trichocarpa
Potri.016G008000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 382691-387690 Populus trichocarpa
Potri.016G008000 10.0kb upstream 10.0kb upstream 10696 true Chr16: 387691-398386 Populus trichocarpa
Potri.016G008000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 388387-398386 Populus trichocarpa
Potri.016G008000 10.0kb downstream 10.0kb downstream 10696 true Chr16: 377691-388386 Populus trichocarpa
Potri.016G008000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 377691-387690 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091     Low Low
cufflinks 1.562       High
cufflinks 0.661        
cufflinks 0.345        
cufflinks 0.622        
cufflinks 3.942       High
cufflinks 0.085     Low Low
cufflinks 0.06     Low Low
cufflinks 0.379        
cufflinks 0.127     Low Low
cufflinks 2.647       High
cufflinks 0.152     Low  
cufflinks 0.601        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.918        
cufflinks 0.723        
cufflinks 0.721        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.331        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.584       High
cufflinks 1.376        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.278        
cufflinks 0.262     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.434        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain