Gene : Potri.014G130900 P. trichocarpa v3.0
Defline:  (1 of 2) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  1309
Name:  ? Potri.014G130900 Secondary Identifier:  ? PAC:27032934
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6908 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G130900 0.5kb upstream 0.5kb upstream 5684 true Chr14: 9979663-9985346 Populus trichocarpa
Potri.014G130900 0.5kb upstream 0.5kb upstream 500 false Chr14: 9979663-9980162 Populus trichocarpa
Potri.014G130900 0.5kb downstream 0.5kb downstream 5684 true Chr14: 9980163-9985846 Populus trichocarpa
Potri.014G130900 0.5kb downstream 0.5kb downstream 500 false Chr14: 9985347-9985846 Populus trichocarpa
Potri.014G130900 1.0kb upstream 1.0kb upstream 6184 true Chr14: 9979163-9985346 Populus trichocarpa
Potri.014G130900 1.0kb upstream 1.0kb upstream 1000 false Chr14: 9979163-9980162 Populus trichocarpa
Potri.014G130900 1.0kb downstream 1.0kb downstream 6184 true Chr14: 9980163-9986346 Populus trichocarpa
Potri.014G130900 1.0kb downstream 1.0kb downstream 1000 false Chr14: 9985347-9986346 Populus trichocarpa
Potri.014G130900 2.0kb upstream 2.0kb upstream 7184 true Chr14: 9978163-9985346 Populus trichocarpa
Potri.014G130900 2.0kb upstream 2.0kb upstream 2000 false Chr14: 9978163-9980162 Populus trichocarpa
Potri.014G130900 2.0kb downstream 2.0kb downstream 7184 true Chr14: 9980163-9987346 Populus trichocarpa
Potri.014G130900 2.0kb downstream 2.0kb downstream 2000 false Chr14: 9985347-9987346 Populus trichocarpa
Potri.014G130900 5.0kb upstream 5.0kb upstream 10184 true Chr14: 9975163-9985346 Populus trichocarpa
Potri.014G130900 5.0kb upstream 5.0kb upstream 5000 false Chr14: 9975163-9980162 Populus trichocarpa
Potri.014G130900 5.0kb downstream 5.0kb downstream 10184 true Chr14: 9980163-9990346 Populus trichocarpa
Potri.014G130900 5.0kb downstream 5.0kb downstream 5000 false Chr14: 9985347-9990346 Populus trichocarpa
Potri.014G130900 10.0kb upstream 10.0kb upstream 15184 true Chr14: 9970163-9985346 Populus trichocarpa
Potri.014G130900 10.0kb upstream 10.0kb upstream 10000 false Chr14: 9970163-9980162 Populus trichocarpa
Potri.014G130900 10.0kb downstream 10.0kb downstream 15184 true Chr14: 9980163-9995346 Populus trichocarpa
Potri.014G130900 10.0kb downstream 10.0kb downstream 10000 false Chr14: 9985347-9995346 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47        
cufflinks 0.766        
cufflinks 0.596        
cufflinks 0.539        
cufflinks 0.608        
cufflinks 0.928       High
cufflinks 0.711        
cufflinks 0.508        
cufflinks 0.463        
cufflinks 0.777        
cufflinks 1.181       High
cufflinks 0.691        
cufflinks 0.687        
cufflinks 0.609        
cufflinks 0.732        
cufflinks 0.739        
cufflinks 0.309       Low
cufflinks 0.417       Low
cufflinks 0.66        
cufflinks 0.487        
cufflinks 0.364       Low
cufflinks 0.898       High
cufflinks 0.591        
cufflinks 0.394       Low
cufflinks 20.849       High
cufflinks 13.31        
cufflinks 11.57        
cufflinks 20.547       High
cufflinks 14.972        
cufflinks 17.039        

0 Strain