Gene : Potri.014G083400 P. trichocarpa v3.0
Defline:  (1 of 3) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  834
Name:  ? Potri.014G083400 Secondary Identifier:  ? PAC:27032113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6689 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G083400 0.5kb upstream 0.5kb upstream 4197 true Chr14: 6576894-6581090 Populus trichocarpa
Potri.014G083400 0.5kb upstream 0.5kb upstream 500 false Chr14: 6580591-6581090 Populus trichocarpa
Potri.014G083400 0.5kb downstream 0.5kb downstream 4197 true Chr14: 6576394-6580590 Populus trichocarpa
Potri.014G083400 0.5kb downstream 0.5kb downstream 500 false Chr14: 6576394-6576893 Populus trichocarpa
Potri.014G083400 1.0kb upstream 1.0kb upstream 4697 true Chr14: 6576894-6581590 Populus trichocarpa
Potri.014G083400 1.0kb upstream 1.0kb upstream 1000 false Chr14: 6580591-6581590 Populus trichocarpa
Potri.014G083400 1.0kb downstream 1.0kb downstream 4697 true Chr14: 6575894-6580590 Populus trichocarpa
Potri.014G083400 1.0kb downstream 1.0kb downstream 1000 false Chr14: 6575894-6576893 Populus trichocarpa
Potri.014G083400 2.0kb upstream 2.0kb upstream 5697 true Chr14: 6576894-6582590 Populus trichocarpa
Potri.014G083400 2.0kb upstream 2.0kb upstream 2000 false Chr14: 6580591-6582590 Populus trichocarpa
Potri.014G083400 2.0kb downstream 2.0kb downstream 5697 true Chr14: 6574894-6580590 Populus trichocarpa
Potri.014G083400 2.0kb downstream 2.0kb downstream 2000 false Chr14: 6574894-6576893 Populus trichocarpa
Potri.014G083400 5.0kb upstream 5.0kb upstream 8697 true Chr14: 6576894-6585590 Populus trichocarpa
Potri.014G083400 5.0kb upstream 5.0kb upstream 5000 false Chr14: 6580591-6585590 Populus trichocarpa
Potri.014G083400 5.0kb downstream 5.0kb downstream 8697 true Chr14: 6571894-6580590 Populus trichocarpa
Potri.014G083400 5.0kb downstream 5.0kb downstream 5000 false Chr14: 6571894-6576893 Populus trichocarpa
Potri.014G083400 10.0kb upstream 10.0kb upstream 13697 true Chr14: 6576894-6590590 Populus trichocarpa
Potri.014G083400 10.0kb upstream 10.0kb upstream 10000 false Chr14: 6580591-6590590 Populus trichocarpa
Potri.014G083400 10.0kb downstream 10.0kb downstream 13697 true Chr14: 6566894-6580590 Populus trichocarpa
Potri.014G083400 10.0kb downstream 10.0kb downstream 10000 false Chr14: 6566894-6576893 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236       Low
cufflinks 0.303        
cufflinks 0.27       Low
cufflinks 0.967       High
cufflinks 0.282        
cufflinks 0.436        
cufflinks 0.277       Low
cufflinks 0.306        
cufflinks 0.424        
cufflinks 0.471        
cufflinks 0.484        
cufflinks 0.458        
cufflinks 0.25       Low
cufflinks 0.817       High
cufflinks 0.531        
cufflinks 0.923       High
cufflinks 0.44        
cufflinks 0.474        
cufflinks 0.343        
cufflinks 0.394        
cufflinks 0.25       Low
cufflinks 0.569        
cufflinks 0.457        
cufflinks 0.764       High
cufflinks 3.316        
cufflinks 6.829       High
cufflinks 4.824        
cufflinks 3.887        
cufflinks 3.706        
cufflinks 6.343       High

0 Strain