Gene : Potri.016G017500 P. trichocarpa v3.0
Defline:  (1 of 1) KOG2804 - Phosphorylcholine transferase/cholinephosphate cytidylyltransferase Genomic Order:  175
Name:  ? Potri.016G017500 Secondary Identifier:  ? PAC:27012754
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY4FS-2 Populus trichocarpa pathologic  
Ptrichocarpa PWY3O-450 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3561 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G017500 0.5kb upstream 0.5kb upstream 3975 true Chr16: 940048-944022 Populus trichocarpa
Potri.016G017500 0.5kb upstream 0.5kb upstream 500 false Chr16: 943523-944022 Populus trichocarpa
Potri.016G017500 0.5kb downstream 0.5kb downstream 3975 true Chr16: 939548-943522 Populus trichocarpa
Potri.016G017500 0.5kb downstream 0.5kb downstream 500 false Chr16: 939548-940047 Populus trichocarpa
Potri.016G017500 1.0kb upstream 1.0kb upstream 4475 true Chr16: 940048-944522 Populus trichocarpa
Potri.016G017500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 943523-944522 Populus trichocarpa
Potri.016G017500 1.0kb downstream 1.0kb downstream 4475 true Chr16: 939048-943522 Populus trichocarpa
Potri.016G017500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 939048-940047 Populus trichocarpa
Potri.016G017500 2.0kb upstream 2.0kb upstream 5475 true Chr16: 940048-945522 Populus trichocarpa
Potri.016G017500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 943523-945522 Populus trichocarpa
Potri.016G017500 2.0kb downstream 2.0kb downstream 5475 true Chr16: 938048-943522 Populus trichocarpa
Potri.016G017500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 938048-940047 Populus trichocarpa
Potri.016G017500 5.0kb upstream 5.0kb upstream 8475 true Chr16: 940048-948522 Populus trichocarpa
Potri.016G017500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 943523-948522 Populus trichocarpa
Potri.016G017500 5.0kb downstream 5.0kb downstream 8475 true Chr16: 935048-943522 Populus trichocarpa
Potri.016G017500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 935048-940047 Populus trichocarpa
Potri.016G017500 10.0kb upstream 10.0kb upstream 13475 true Chr16: 940048-953522 Populus trichocarpa
Potri.016G017500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 943523-953522 Populus trichocarpa
Potri.016G017500 10.0kb downstream 10.0kb downstream 13475 true Chr16: 930048-943522 Populus trichocarpa
Potri.016G017500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 930048-940047 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.856     High  
cufflinks 19.293     High Low
cufflinks 27.422     High  
cufflinks 23.875     High  
cufflinks 29.401     High  
cufflinks 36.184     High  
cufflinks 55.765     High High
cufflinks 19.463     High Low
cufflinks 29.364     High  
cufflinks 20.629     High  
cufflinks 27.231     High  
cufflinks 50.077     High High
cufflinks 23.61     High  
cufflinks 21.777     High  
cufflinks 11.923     High Low
cufflinks 58.22     High High
cufflinks 66.526     High High
cufflinks 41.574     High  
cufflinks 44.463     High  
cufflinks 29.385     High  
cufflinks 45.876     High  
cufflinks 20.246     High  
cufflinks 34.537     High  
cufflinks 24.911     High  
cufflinks 235.692     High  
cufflinks 224.379     High  
cufflinks 199.776     High  
cufflinks 227.589     High  
cufflinks 158.823     High  
cufflinks 258.734     High  

0 Strain