Gene : Potri.016G029200 P. trichocarpa v3.0
Defline:  (1 of 3) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) Genomic Order:  292
Name:  ? Potri.016G029200 Secondary Identifier:  ? PAC:27011633
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G029200 0.5kb upstream 0.5kb upstream 10115 true Chr16: 1640384-1650498 Populus trichocarpa
Potri.016G029200 0.5kb upstream 0.5kb upstream 500 false Chr16: 1640384-1640883 Populus trichocarpa
Potri.016G029200 0.5kb downstream 0.5kb downstream 10115 true Chr16: 1640884-1650998 Populus trichocarpa
Potri.016G029200 0.5kb downstream 0.5kb downstream 500 false Chr16: 1650499-1650998 Populus trichocarpa
Potri.016G029200 1.0kb upstream 1.0kb upstream 10615 true Chr16: 1639884-1650498 Populus trichocarpa
Potri.016G029200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 1639884-1640883 Populus trichocarpa
Potri.016G029200 1.0kb downstream 1.0kb downstream 10615 true Chr16: 1640884-1651498 Populus trichocarpa
Potri.016G029200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 1650499-1651498 Populus trichocarpa
Potri.016G029200 2.0kb upstream 2.0kb upstream 11615 true Chr16: 1638884-1650498 Populus trichocarpa
Potri.016G029200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 1638884-1640883 Populus trichocarpa
Potri.016G029200 2.0kb downstream 2.0kb downstream 11615 true Chr16: 1640884-1652498 Populus trichocarpa
Potri.016G029200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 1650499-1652498 Populus trichocarpa
Potri.016G029200 5.0kb upstream 5.0kb upstream 14615 true Chr16: 1635884-1650498 Populus trichocarpa
Potri.016G029200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 1635884-1640883 Populus trichocarpa
Potri.016G029200 5.0kb downstream 5.0kb downstream 14615 true Chr16: 1640884-1655498 Populus trichocarpa
Potri.016G029200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 1650499-1655498 Populus trichocarpa
Potri.016G029200 10.0kb upstream 10.0kb upstream 19615 true Chr16: 1630884-1650498 Populus trichocarpa
Potri.016G029200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 1630884-1640883 Populus trichocarpa
Potri.016G029200 10.0kb downstream 10.0kb downstream 19615 true Chr16: 1640884-1660498 Populus trichocarpa
Potri.016G029200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 1650499-1660498 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.079        
cufflinks 2.047        
cufflinks 1.851        
cufflinks 8.647       High
cufflinks 1.768       Low
cufflinks 5.6       High
cufflinks 2.079        
cufflinks 1.315       Low
cufflinks 3.154        
cufflinks 1.672       Low
cufflinks 2.889        
cufflinks 2.488        
cufflinks 2.141        
cufflinks 2.484        
cufflinks 3.412        
cufflinks 3.633        
cufflinks 3.087        
cufflinks 2.493        
cufflinks 3.206        
cufflinks 2.258        
cufflinks 5.891       High
cufflinks 4.388       High
cufflinks 2.918        
cufflinks 2.649        
cufflinks 40.788     High  
cufflinks 60.254     High High
cufflinks 56.451     High  
cufflinks 43.881     High  
cufflinks 40.566     High  
cufflinks 52.564     High  

0 Strain