Gene : Potri.014G071100 P. trichocarpa v3.0

Defline:  (1 of 2) 4.3.3.7 - 4-hydroxy-tetrahydrodipicolinate synthase / Dihydrodipicolinate synthetase Genomic Order:  711
Name:  ? Potri.014G071100 Secondary Identifier:  ? PAC:27035189

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-724 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5097 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G071100 0.5kb upstream 0.5kb upstream 2527 true Chr14: 5768496-5771022 Populus trichocarpa
Potri.014G071100 0.5kb upstream 0.5kb upstream 500 false Chr14: 5768496-5768995 Populus trichocarpa
Potri.014G071100 0.5kb downstream 0.5kb downstream 2527 true Chr14: 5768996-5771522 Populus trichocarpa
Potri.014G071100 0.5kb downstream 0.5kb downstream 500 false Chr14: 5771023-5771522 Populus trichocarpa
Potri.014G071100 1.0kb upstream 1.0kb upstream 3027 true Chr14: 5767996-5771022 Populus trichocarpa
Potri.014G071100 1.0kb upstream 1.0kb upstream 1000 false Chr14: 5767996-5768995 Populus trichocarpa
Potri.014G071100 1.0kb downstream 1.0kb downstream 3027 true Chr14: 5768996-5772022 Populus trichocarpa
Potri.014G071100 1.0kb downstream 1.0kb downstream 1000 false Chr14: 5771023-5772022 Populus trichocarpa
Potri.014G071100 2.0kb upstream 2.0kb upstream 4027 true Chr14: 5766996-5771022 Populus trichocarpa
Potri.014G071100 2.0kb upstream 2.0kb upstream 2000 false Chr14: 5766996-5768995 Populus trichocarpa
Potri.014G071100 2.0kb downstream 2.0kb downstream 4027 true Chr14: 5768996-5773022 Populus trichocarpa
Potri.014G071100 2.0kb downstream 2.0kb downstream 2000 false Chr14: 5771023-5773022 Populus trichocarpa
Potri.014G071100 5.0kb upstream 5.0kb upstream 7027 true Chr14: 5763996-5771022 Populus trichocarpa
Potri.014G071100 5.0kb upstream 5.0kb upstream 5000 false Chr14: 5763996-5768995 Populus trichocarpa
Potri.014G071100 5.0kb downstream 5.0kb downstream 7027 true Chr14: 5768996-5776022 Populus trichocarpa
Potri.014G071100 5.0kb downstream 5.0kb downstream 5000 false Chr14: 5771023-5776022 Populus trichocarpa
Potri.014G071100 10.0kb upstream 10.0kb upstream 12027 true Chr14: 5758996-5771022 Populus trichocarpa
Potri.014G071100 10.0kb upstream 10.0kb upstream 10000 false Chr14: 5758996-5768995 Populus trichocarpa
Potri.014G071100 10.0kb downstream 10.0kb downstream 12027 true Chr14: 5768996-5781022 Populus trichocarpa
Potri.014G071100 10.0kb downstream 10.0kb downstream 10000 false Chr14: 5771023-5781022 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.383        
cufflinks 1.792       Low
cufflinks 2.669        
cufflinks 3.544        
cufflinks 3.751        
cufflinks 4.309       High
cufflinks 2.424        
cufflinks 2.096        
cufflinks 3.103        
cufflinks 1.296       Low
cufflinks 3.365        
cufflinks 4.185       High
cufflinks 5.576       High
cufflinks 4.641       High
cufflinks 1.624       Low
cufflinks 3.648        
cufflinks 2.913        
cufflinks 2.688        
cufflinks 2.156        
cufflinks 1.734       Low
cufflinks 5.263       High
cufflinks 3.062        
cufflinks 2.026        
cufflinks 2.983        
cufflinks 23.543        
cufflinks 28.565     High  
cufflinks 28.764     High  
cufflinks 37.248     High High
cufflinks 28.605     High  
cufflinks 29.718     High  

0 Strain