Gene : Potri.014G058500 P. trichocarpa v3.0
Defline:  (1 of 2) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) Genomic Order:  585
Name:  ? Potri.014G058500 Secondary Identifier:  ? PAC:27032011
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G058500 0.5kb upstream 0.5kb upstream 6532 true Chr14: 4527855-4534386 Populus trichocarpa
Potri.014G058500 0.5kb upstream 0.5kb upstream 500 false Chr14: 4527855-4528354 Populus trichocarpa
Potri.014G058500 0.5kb downstream 0.5kb downstream 6532 true Chr14: 4528355-4534886 Populus trichocarpa
Potri.014G058500 0.5kb downstream 0.5kb downstream 500 false Chr14: 4534387-4534886 Populus trichocarpa
Potri.014G058500 1.0kb upstream 1.0kb upstream 7032 true Chr14: 4527355-4534386 Populus trichocarpa
Potri.014G058500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4527355-4528354 Populus trichocarpa
Potri.014G058500 1.0kb downstream 1.0kb downstream 7032 true Chr14: 4528355-4535386 Populus trichocarpa
Potri.014G058500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4534387-4535386 Populus trichocarpa
Potri.014G058500 2.0kb upstream 2.0kb upstream 8032 true Chr14: 4526355-4534386 Populus trichocarpa
Potri.014G058500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4526355-4528354 Populus trichocarpa
Potri.014G058500 2.0kb downstream 2.0kb downstream 8032 true Chr14: 4528355-4536386 Populus trichocarpa
Potri.014G058500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4534387-4536386 Populus trichocarpa
Potri.014G058500 5.0kb upstream 5.0kb upstream 11032 true Chr14: 4523355-4534386 Populus trichocarpa
Potri.014G058500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4523355-4528354 Populus trichocarpa
Potri.014G058500 5.0kb downstream 5.0kb downstream 11032 true Chr14: 4528355-4539386 Populus trichocarpa
Potri.014G058500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4534387-4539386 Populus trichocarpa
Potri.014G058500 10.0kb upstream 10.0kb upstream 16032 true Chr14: 4518355-4534386 Populus trichocarpa
Potri.014G058500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4518355-4528354 Populus trichocarpa
Potri.014G058500 10.0kb downstream 10.0kb downstream 16032 true Chr14: 4528355-4544386 Populus trichocarpa
Potri.014G058500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4534387-4544386 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.497     High  
cufflinks 12.211     High  
cufflinks 8.215       Low
cufflinks 14.851     High  
cufflinks 12.428     High  
cufflinks 5.81       Low
cufflinks 16.748     High High
cufflinks 12.021     High  
cufflinks 11.664     High  
cufflinks 13.664     High  
cufflinks 9.798        
cufflinks 7.956       Low
cufflinks 13.815     High  
cufflinks 14.32     High  
cufflinks 6.308       Low
cufflinks 14.388     High  
cufflinks 10.16        
cufflinks 12.904     High  
cufflinks 12.374     High  
cufflinks 8.032       Low
cufflinks 10.887     High  
cufflinks 15.175     High  
cufflinks 14.918     High  
cufflinks 15.809     High High
cufflinks 37.454     High  
cufflinks 32.459     High  
cufflinks 38.415     High  
cufflinks 51.803     High  
cufflinks 76.658     High High
cufflinks 29.911     High  

0 Strain