Gene : Potri.016G037500 P. trichocarpa v3.0
Defline:  (1 of 2) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  375
Name:  ? Potri.016G037500 Secondary Identifier:  ? PAC:27012237
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G037500 0.5kb upstream 0.5kb upstream 3247 true Chr16: 2293290-2296536 Populus trichocarpa
Potri.016G037500 0.5kb upstream 0.5kb upstream 500 false Chr16: 2293290-2293789 Populus trichocarpa
Potri.016G037500 0.5kb downstream 0.5kb downstream 3247 true Chr16: 2293790-2297036 Populus trichocarpa
Potri.016G037500 0.5kb downstream 0.5kb downstream 500 false Chr16: 2296537-2297036 Populus trichocarpa
Potri.016G037500 1.0kb upstream 1.0kb upstream 3747 true Chr16: 2292790-2296536 Populus trichocarpa
Potri.016G037500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2292790-2293789 Populus trichocarpa
Potri.016G037500 1.0kb downstream 1.0kb downstream 3747 true Chr16: 2293790-2297536 Populus trichocarpa
Potri.016G037500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2296537-2297536 Populus trichocarpa
Potri.016G037500 2.0kb upstream 2.0kb upstream 4747 true Chr16: 2291790-2296536 Populus trichocarpa
Potri.016G037500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2291790-2293789 Populus trichocarpa
Potri.016G037500 2.0kb downstream 2.0kb downstream 4747 true Chr16: 2293790-2298536 Populus trichocarpa
Potri.016G037500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2296537-2298536 Populus trichocarpa
Potri.016G037500 5.0kb upstream 5.0kb upstream 7747 true Chr16: 2288790-2296536 Populus trichocarpa
Potri.016G037500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2288790-2293789 Populus trichocarpa
Potri.016G037500 5.0kb downstream 5.0kb downstream 7747 true Chr16: 2293790-2301536 Populus trichocarpa
Potri.016G037500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2296537-2301536 Populus trichocarpa
Potri.016G037500 10.0kb upstream 10.0kb upstream 12747 true Chr16: 2283790-2296536 Populus trichocarpa
Potri.016G037500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2283790-2293789 Populus trichocarpa
Potri.016G037500 10.0kb downstream 10.0kb downstream 12747 true Chr16: 2293790-2306536 Populus trichocarpa
Potri.016G037500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2296537-2306536 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.718       Low
cufflinks 3.77        
cufflinks 4.06        
cufflinks 7.517       High
cufflinks 7.114       High
cufflinks 6.021       High
cufflinks 1.358       Low
cufflinks 3.412        
cufflinks 2.164       Low
cufflinks 4.215        
cufflinks 2.969        
cufflinks 6.965       High
cufflinks 4.386        
cufflinks 2.338        
cufflinks 2.942        
cufflinks 3.334        
cufflinks 3.756        
cufflinks 3.231        
cufflinks 4.036        
cufflinks 6.718       High
cufflinks 3.309        
cufflinks 4.0        
cufflinks 2.029       Low
cufflinks 4.16        
cufflinks 12.451        
cufflinks 7.023        
cufflinks 8.029        
cufflinks 18.23       High
cufflinks 20.855       High
cufflinks 8.967        

0 Strain