Gene : Potri.016G099400 P. trichocarpa v3.0
Defline:  (1 of 2) K03969 - phage shock protein A (pspA) Genomic Order:  994
Name:  ? Potri.016G099400 Secondary Identifier:  ? PAC:27013934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G099400 0.5kb upstream 0.5kb upstream 8206 true Chr16: 9722054-9730259 Populus trichocarpa
Potri.016G099400 0.5kb upstream 0.5kb upstream 500 false Chr16: 9722054-9722553 Populus trichocarpa
Potri.016G099400 0.5kb downstream 0.5kb downstream 8206 true Chr16: 9722554-9730759 Populus trichocarpa
Potri.016G099400 0.5kb downstream 0.5kb downstream 500 false Chr16: 9730260-9730759 Populus trichocarpa
Potri.016G099400 1.0kb upstream 1.0kb upstream 8706 true Chr16: 9721554-9730259 Populus trichocarpa
Potri.016G099400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9721554-9722553 Populus trichocarpa
Potri.016G099400 1.0kb downstream 1.0kb downstream 8706 true Chr16: 9722554-9731259 Populus trichocarpa
Potri.016G099400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9730260-9731259 Populus trichocarpa
Potri.016G099400 2.0kb upstream 2.0kb upstream 9706 true Chr16: 9720554-9730259 Populus trichocarpa
Potri.016G099400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9720554-9722553 Populus trichocarpa
Potri.016G099400 2.0kb downstream 2.0kb downstream 9706 true Chr16: 9722554-9732259 Populus trichocarpa
Potri.016G099400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9730260-9732259 Populus trichocarpa
Potri.016G099400 5.0kb upstream 5.0kb upstream 12706 true Chr16: 9717554-9730259 Populus trichocarpa
Potri.016G099400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9717554-9722553 Populus trichocarpa
Potri.016G099400 5.0kb downstream 5.0kb downstream 12706 true Chr16: 9722554-9735259 Populus trichocarpa
Potri.016G099400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9730260-9735259 Populus trichocarpa
Potri.016G099400 10.0kb upstream 10.0kb upstream 17706 true Chr16: 9712554-9730259 Populus trichocarpa
Potri.016G099400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9712554-9722553 Populus trichocarpa
Potri.016G099400 10.0kb downstream 10.0kb downstream 17706 true Chr16: 9722554-9740259 Populus trichocarpa
Potri.016G099400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9730260-9740259 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.379        
cufflinks 1.016       High
cufflinks 1.714       High
cufflinks 0.285       Low
cufflinks 0.584        
cufflinks 0.604        
cufflinks 0.234       Low
cufflinks 0.315       Low
cufflinks 0.51        
cufflinks 0.55        
cufflinks 0.516        
cufflinks 0.827        
cufflinks 0.669        
cufflinks 0.414        
cufflinks 0.88        
cufflinks 0.253       Low
cufflinks 1.096       High
cufflinks 1.185       High
cufflinks 0.758        
cufflinks 0.888        
cufflinks 0.825        
cufflinks 0.576        
cufflinks 0.547        
cufflinks 0.549        
cufflinks 21.749        
cufflinks 20.733        
cufflinks 19.668        
cufflinks 21.672        
cufflinks 17.165        
cufflinks 21.449        

0 Strain