Gene : Potri.016G083100 P. trichocarpa v3.0
Defline:  (1 of 1) PF08302 - Fungal tRNA ligase phosphodiesterase domain (tRNA_lig_CPD) Genomic Order:  831
Name:  ? Potri.016G083100 Secondary Identifier:  ? PAC:27012721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G083100 0.5kb upstream 0.5kb upstream 21599 true Chr16: 6445731-6467329 Populus trichocarpa
Potri.016G083100 0.5kb upstream 0.5kb upstream 500 false Chr16: 6466830-6467329 Populus trichocarpa
Potri.016G083100 0.5kb downstream 0.5kb downstream 21599 true Chr16: 6445231-6466829 Populus trichocarpa
Potri.016G083100 0.5kb downstream 0.5kb downstream 500 false Chr16: 6445231-6445730 Populus trichocarpa
Potri.016G083100 1.0kb upstream 1.0kb upstream 22099 true Chr16: 6445731-6467829 Populus trichocarpa
Potri.016G083100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 6466830-6467829 Populus trichocarpa
Potri.016G083100 1.0kb downstream 1.0kb downstream 22099 true Chr16: 6444731-6466829 Populus trichocarpa
Potri.016G083100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 6444731-6445730 Populus trichocarpa
Potri.016G083100 2.0kb upstream 2.0kb upstream 23099 true Chr16: 6445731-6468829 Populus trichocarpa
Potri.016G083100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 6466830-6468829 Populus trichocarpa
Potri.016G083100 2.0kb downstream 2.0kb downstream 23099 true Chr16: 6443731-6466829 Populus trichocarpa
Potri.016G083100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 6443731-6445730 Populus trichocarpa
Potri.016G083100 5.0kb upstream 5.0kb upstream 26099 true Chr16: 6445731-6471829 Populus trichocarpa
Potri.016G083100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 6466830-6471829 Populus trichocarpa
Potri.016G083100 5.0kb downstream 5.0kb downstream 26099 true Chr16: 6440731-6466829 Populus trichocarpa
Potri.016G083100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 6440731-6445730 Populus trichocarpa
Potri.016G083100 10.0kb upstream 10.0kb upstream 31099 true Chr16: 6445731-6476829 Populus trichocarpa
Potri.016G083100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 6466830-6476829 Populus trichocarpa
Potri.016G083100 10.0kb downstream 10.0kb downstream 31099 true Chr16: 6435731-6466829 Populus trichocarpa
Potri.016G083100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 6435731-6445730 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166       Low
cufflinks 0.233        
cufflinks 0.332        
cufflinks 0.679       High
cufflinks 0.288        
cufflinks 0.323        
cufflinks 0.165       Low
cufflinks 0.262        
cufflinks 0.13     Low Low
cufflinks 0.224        
cufflinks 0.305        
cufflinks 0.274        
cufflinks 0.337        
cufflinks 0.15     Low Low
cufflinks 0.177        
cufflinks 0.298        
cufflinks 0.173       Low
cufflinks 0.207        
cufflinks 0.315        
cufflinks 0.168       Low
cufflinks 0.346        
cufflinks 0.309        
cufflinks 0.284        
cufflinks 0.267        
cufflinks 11.407        
cufflinks 9.015        
cufflinks 8.32        
cufflinks 9.467        
cufflinks 7.751        
cufflinks 10.581        

0 Strain