Gene : Potri.016G091800 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE // SUBFAMILY NOT NAMED Genomic Order:  918
Name:  ? Potri.016G091800 Secondary Identifier:  ? PAC:27012239
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1042 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa PHOTOALL-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAGLYCOLYSIS-PWY Populus trichocarpa pathologic  
Ptrichocarpa SUCSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  
Ptrichocarpa CALVIN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ANAEROFRUCAT-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G091800 0.5kb upstream 0.5kb upstream 7952 true Chr16: 7569471-7577422 Populus trichocarpa
Potri.016G091800 0.5kb upstream 0.5kb upstream 500 false Chr16: 7576923-7577422 Populus trichocarpa
Potri.016G091800 0.5kb downstream 0.5kb downstream 7952 true Chr16: 7568971-7576922 Populus trichocarpa
Potri.016G091800 0.5kb downstream 0.5kb downstream 500 false Chr16: 7568971-7569470 Populus trichocarpa
Potri.016G091800 1.0kb upstream 1.0kb upstream 8452 true Chr16: 7569471-7577922 Populus trichocarpa
Potri.016G091800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 7576923-7577922 Populus trichocarpa
Potri.016G091800 1.0kb downstream 1.0kb downstream 8452 true Chr16: 7568471-7576922 Populus trichocarpa
Potri.016G091800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 7568471-7569470 Populus trichocarpa
Potri.016G091800 2.0kb upstream 2.0kb upstream 9452 true Chr16: 7569471-7578922 Populus trichocarpa
Potri.016G091800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 7576923-7578922 Populus trichocarpa
Potri.016G091800 2.0kb downstream 2.0kb downstream 9452 true Chr16: 7567471-7576922 Populus trichocarpa
Potri.016G091800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 7567471-7569470 Populus trichocarpa
Potri.016G091800 5.0kb upstream 5.0kb upstream 12452 true Chr16: 7569471-7581922 Populus trichocarpa
Potri.016G091800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 7576923-7581922 Populus trichocarpa
Potri.016G091800 5.0kb downstream 5.0kb downstream 12452 true Chr16: 7564471-7576922 Populus trichocarpa
Potri.016G091800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 7564471-7569470 Populus trichocarpa
Potri.016G091800 10.0kb upstream 10.0kb upstream 17452 true Chr16: 7569471-7586922 Populus trichocarpa
Potri.016G091800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 7576923-7586922 Populus trichocarpa
Potri.016G091800 10.0kb downstream 10.0kb downstream 17452 true Chr16: 7559471-7576922 Populus trichocarpa
Potri.016G091800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 7559471-7569470 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.203       Low
cufflinks 0.437        
cufflinks 0.615        
cufflinks 0.46        
cufflinks 0.964       High
cufflinks 0.696       High
cufflinks 0.445        
cufflinks 0.362        
cufflinks 0.437        
cufflinks 0.64       High
cufflinks 0.498        
cufflinks 0.469        
cufflinks 0.273       Low
cufflinks 0.386        
cufflinks 0.468        
cufflinks 0.285       Low
cufflinks 0.63       High
cufflinks 0.361        
cufflinks 0.189       Low
cufflinks 0.339        
cufflinks 0.397        
cufflinks 0.294        
cufflinks 0.419        
cufflinks 0.594        
cufflinks 4.618        
cufflinks 2.568       Low
cufflinks 2.963        
cufflinks 4.928        
cufflinks 3.998        
cufflinks 4.26        

0 Strain