Gene : Potri.016G059800 P. trichocarpa v3.0
Defline:  (1 of 2) K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) Genomic Order:  598
Name:  ? Potri.016G059800 Secondary Identifier:  ? PAC:27013824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G059800 0.5kb upstream 0.5kb upstream 3240 true Chr16: 4125398-4128637 Populus trichocarpa
Potri.016G059800 0.5kb upstream 0.5kb upstream 500 false Chr16: 4125398-4125897 Populus trichocarpa
Potri.016G059800 0.5kb downstream 0.5kb downstream 3240 true Chr16: 4125898-4129137 Populus trichocarpa
Potri.016G059800 0.5kb downstream 0.5kb downstream 500 false Chr16: 4128638-4129137 Populus trichocarpa
Potri.016G059800 1.0kb upstream 1.0kb upstream 3740 true Chr16: 4124898-4128637 Populus trichocarpa
Potri.016G059800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 4124898-4125897 Populus trichocarpa
Potri.016G059800 1.0kb downstream 1.0kb downstream 3740 true Chr16: 4125898-4129637 Populus trichocarpa
Potri.016G059800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 4128638-4129637 Populus trichocarpa
Potri.016G059800 2.0kb upstream 2.0kb upstream 4740 true Chr16: 4123898-4128637 Populus trichocarpa
Potri.016G059800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 4123898-4125897 Populus trichocarpa
Potri.016G059800 2.0kb downstream 2.0kb downstream 4740 true Chr16: 4125898-4130637 Populus trichocarpa
Potri.016G059800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 4128638-4130637 Populus trichocarpa
Potri.016G059800 5.0kb upstream 5.0kb upstream 7740 true Chr16: 4120898-4128637 Populus trichocarpa
Potri.016G059800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 4120898-4125897 Populus trichocarpa
Potri.016G059800 5.0kb downstream 5.0kb downstream 7740 true Chr16: 4125898-4133637 Populus trichocarpa
Potri.016G059800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 4128638-4133637 Populus trichocarpa
Potri.016G059800 10.0kb upstream 10.0kb upstream 12740 true Chr16: 4115898-4128637 Populus trichocarpa
Potri.016G059800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 4115898-4125897 Populus trichocarpa
Potri.016G059800 10.0kb downstream 10.0kb downstream 12740 true Chr16: 4125898-4138637 Populus trichocarpa
Potri.016G059800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 4128638-4138637 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.39     High  
cufflinks 16.457     High  
cufflinks 28.482     High  
cufflinks 11.812     High  
cufflinks 36.05     High  
cufflinks 63.011     High High
cufflinks 13.231     High  
cufflinks 20.145     High  
cufflinks 10.149     High Low
cufflinks 22.448     High  
cufflinks 19.54     High  
cufflinks 18.578     High  
cufflinks 31.383     High  
cufflinks 10.503     High Low
cufflinks 39.98     High High
cufflinks 5.861       Low
cufflinks 38.324     High High
cufflinks 11.88     High  
cufflinks 23.455     High  
cufflinks 34.164     High  
cufflinks 54.799     High High
cufflinks 9.767     High Low
cufflinks 14.008     High  
cufflinks 11.674     High  
cufflinks 6.447        
cufflinks 9.222        
cufflinks 8.875        
cufflinks 6.427        
cufflinks 5.367       Low
cufflinks 9.056        

0 Strain