Gene : Potri.016G055200 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR34267//PTHR34267:SF1 - FAMILY NOT NAMED // AT0ZI1 PROTEIN Genomic Order:  552
Name:  ? Potri.016G055200 Secondary Identifier:  ? PAC:27012879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G055200 0.5kb upstream 0.5kb upstream 3373 true Chr16: 3613673-3617045 Populus trichocarpa
Potri.016G055200 0.5kb upstream 0.5kb upstream 500 false Chr16: 3613673-3614172 Populus trichocarpa
Potri.016G055200 0.5kb downstream 0.5kb downstream 3373 true Chr16: 3614173-3617545 Populus trichocarpa
Potri.016G055200 0.5kb downstream 0.5kb downstream 500 false Chr16: 3617046-3617545 Populus trichocarpa
Potri.016G055200 1.0kb upstream 1.0kb upstream 3873 true Chr16: 3613173-3617045 Populus trichocarpa
Potri.016G055200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3613173-3614172 Populus trichocarpa
Potri.016G055200 1.0kb downstream 1.0kb downstream 3873 true Chr16: 3614173-3618045 Populus trichocarpa
Potri.016G055200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3617046-3618045 Populus trichocarpa
Potri.016G055200 2.0kb upstream 2.0kb upstream 4873 true Chr16: 3612173-3617045 Populus trichocarpa
Potri.016G055200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3612173-3614172 Populus trichocarpa
Potri.016G055200 2.0kb downstream 2.0kb downstream 4873 true Chr16: 3614173-3619045 Populus trichocarpa
Potri.016G055200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3617046-3619045 Populus trichocarpa
Potri.016G055200 5.0kb upstream 5.0kb upstream 7873 true Chr16: 3609173-3617045 Populus trichocarpa
Potri.016G055200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3609173-3614172 Populus trichocarpa
Potri.016G055200 5.0kb downstream 5.0kb downstream 7873 true Chr16: 3614173-3622045 Populus trichocarpa
Potri.016G055200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3617046-3622045 Populus trichocarpa
Potri.016G055200 10.0kb upstream 10.0kb upstream 12873 true Chr16: 3604173-3617045 Populus trichocarpa
Potri.016G055200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3604173-3614172 Populus trichocarpa
Potri.016G055200 10.0kb downstream 10.0kb downstream 12873 true Chr16: 3614173-3627045 Populus trichocarpa
Potri.016G055200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3617046-3627045 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.443     High High
cufflinks 7.721        
cufflinks 6.767        
cufflinks 2.065       Low
cufflinks 22.853     High High
cufflinks 6.859        
cufflinks 12.544     High  
cufflinks 6.546        
cufflinks 10.203        
cufflinks 12.848     High  
cufflinks 9.668     High  
cufflinks 28.126     High High
cufflinks 10.195     High  
cufflinks 6.928        
cufflinks 17.391     High  
cufflinks 7.303        
cufflinks 9.335        
cufflinks 5.119       Low
cufflinks 23.824     High High
cufflinks 6.454        
cufflinks 16.733     High  
cufflinks 15.896     High  
cufflinks 12.265     High  
cufflinks 16.75     High  
cufflinks 11.006        
cufflinks 4.195       Low
cufflinks 7.329        
cufflinks 8.331        
cufflinks 15.491       High
cufflinks 6.622        

0 Strain