Gene : Potri.016G126000 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR11206:SF101 - MATE EFFLUX FAMILY PROTEIN 2, CHLOROPLASTIC Genomic Order:  1260
Name:  ? Potri.016G126000 Secondary Identifier:  ? PAC:27012224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G126000 0.5kb upstream 0.5kb upstream 7457 true Chr16: 12900579-12908035 Populus trichocarpa
Potri.016G126000 0.5kb upstream 0.5kb upstream 500 false Chr16: 12900579-12901078 Populus trichocarpa
Potri.016G126000 0.5kb downstream 0.5kb downstream 7457 true Chr16: 12901079-12908535 Populus trichocarpa
Potri.016G126000 0.5kb downstream 0.5kb downstream 500 false Chr16: 12908036-12908535 Populus trichocarpa
Potri.016G126000 1.0kb upstream 1.0kb upstream 7957 true Chr16: 12900079-12908035 Populus trichocarpa
Potri.016G126000 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12900079-12901078 Populus trichocarpa
Potri.016G126000 1.0kb downstream 1.0kb downstream 7957 true Chr16: 12901079-12909035 Populus trichocarpa
Potri.016G126000 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12908036-12909035 Populus trichocarpa
Potri.016G126000 2.0kb upstream 2.0kb upstream 8957 true Chr16: 12899079-12908035 Populus trichocarpa
Potri.016G126000 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12899079-12901078 Populus trichocarpa
Potri.016G126000 2.0kb downstream 2.0kb downstream 8957 true Chr16: 12901079-12910035 Populus trichocarpa
Potri.016G126000 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12908036-12910035 Populus trichocarpa
Potri.016G126000 5.0kb upstream 5.0kb upstream 11957 true Chr16: 12896079-12908035 Populus trichocarpa
Potri.016G126000 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12896079-12901078 Populus trichocarpa
Potri.016G126000 5.0kb downstream 5.0kb downstream 11957 true Chr16: 12901079-12913035 Populus trichocarpa
Potri.016G126000 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12908036-12913035 Populus trichocarpa
Potri.016G126000 10.0kb upstream 10.0kb upstream 16957 true Chr16: 12891079-12908035 Populus trichocarpa
Potri.016G126000 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12891079-12901078 Populus trichocarpa
Potri.016G126000 10.0kb downstream 10.0kb downstream 16957 true Chr16: 12901079-12918035 Populus trichocarpa
Potri.016G126000 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12908036-12918035 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.751        
cufflinks 0.967        
cufflinks 0.224       Low
cufflinks 2.244       High
cufflinks 0.233       Low
cufflinks 1.167        
cufflinks 0.594        
cufflinks 1.298        
cufflinks 0.512        
cufflinks 0.893        
cufflinks 1.38        
cufflinks 0.4        
cufflinks 0.728        
cufflinks 0.567        
cufflinks 0.91        
cufflinks 0.322       Low
cufflinks 2.795       High
cufflinks 1.317        
cufflinks 0.505        
cufflinks 0.349       Low
cufflinks 1.827       High
cufflinks 0.674        
cufflinks 0.438        
cufflinks 0.746        
cufflinks 15.449        
cufflinks 14.234        
cufflinks 11.598        
cufflinks 15.633        
cufflinks 13.619        
cufflinks 14.341        

0 Strain