Gene : Potri.017G047600 P. trichocarpa v3.0
Defline:  (1 of 2) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) Genomic Order:  476
Name:  ? Potri.017G047600 Secondary Identifier:  ? PAC:26985435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G047600 0.5kb upstream 0.5kb upstream 23011 true Chr17: 3964039-3987049 Populus trichocarpa
Potri.017G047600 0.5kb upstream 0.5kb upstream 500 false Chr17: 3964039-3964538 Populus trichocarpa
Potri.017G047600 0.5kb downstream 0.5kb downstream 23011 true Chr17: 3964539-3987549 Populus trichocarpa
Potri.017G047600 0.5kb downstream 0.5kb downstream 500 false Chr17: 3987050-3987549 Populus trichocarpa
Potri.017G047600 1.0kb upstream 1.0kb upstream 23511 true Chr17: 3963539-3987049 Populus trichocarpa
Potri.017G047600 1.0kb upstream 1.0kb upstream 1000 false Chr17: 3963539-3964538 Populus trichocarpa
Potri.017G047600 1.0kb downstream 1.0kb downstream 23511 true Chr17: 3964539-3988049 Populus trichocarpa
Potri.017G047600 1.0kb downstream 1.0kb downstream 1000 false Chr17: 3987050-3988049 Populus trichocarpa
Potri.017G047600 2.0kb upstream 2.0kb upstream 24511 true Chr17: 3962539-3987049 Populus trichocarpa
Potri.017G047600 2.0kb upstream 2.0kb upstream 2000 false Chr17: 3962539-3964538 Populus trichocarpa
Potri.017G047600 2.0kb downstream 2.0kb downstream 24511 true Chr17: 3964539-3989049 Populus trichocarpa
Potri.017G047600 2.0kb downstream 2.0kb downstream 2000 false Chr17: 3987050-3989049 Populus trichocarpa
Potri.017G047600 5.0kb upstream 5.0kb upstream 27511 true Chr17: 3959539-3987049 Populus trichocarpa
Potri.017G047600 5.0kb upstream 5.0kb upstream 5000 false Chr17: 3959539-3964538 Populus trichocarpa
Potri.017G047600 5.0kb downstream 5.0kb downstream 27511 true Chr17: 3964539-3992049 Populus trichocarpa
Potri.017G047600 5.0kb downstream 5.0kb downstream 5000 false Chr17: 3987050-3992049 Populus trichocarpa
Potri.017G047600 10.0kb upstream 10.0kb upstream 32511 true Chr17: 3954539-3987049 Populus trichocarpa
Potri.017G047600 10.0kb upstream 10.0kb upstream 10000 false Chr17: 3954539-3964538 Populus trichocarpa
Potri.017G047600 10.0kb downstream 10.0kb downstream 32511 true Chr17: 3964539-3997049 Populus trichocarpa
Potri.017G047600 10.0kb downstream 10.0kb downstream 10000 false Chr17: 3987050-3997049 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.418        
cufflinks 0.342        
cufflinks 0.506        
cufflinks 0.31        
cufflinks 0.35        
cufflinks 0.208       Low
cufflinks 0.622       High
cufflinks 0.257       Low
cufflinks 0.359        
cufflinks 0.308        
cufflinks 0.291        
cufflinks 0.492        
cufflinks 0.321        
cufflinks 0.417        
cufflinks 0.352        
cufflinks 0.741       High
cufflinks 0.357        
cufflinks 1.548       High
cufflinks 0.63       High
cufflinks 0.351        
cufflinks 0.287        
cufflinks 0.391        
cufflinks 0.506        
cufflinks 0.481        
cufflinks 9.762        
cufflinks 14.749       High
cufflinks 14.243       High
cufflinks 11.647        
cufflinks 9.298        
cufflinks 13.054        

0 Strain