Gene : Potri.016G125900 P. trichocarpa v3.0
Defline:  (1 of 2) PF00634 - BRCA2 repeat (BRCA2) Genomic Order:  1259
Name:  ? Potri.016G125900 Secondary Identifier:  ? PAC:27012734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G125900 0.5kb upstream 0.5kb upstream 1542 true Chr16: 12876159-12877700 Populus trichocarpa
Potri.016G125900 0.5kb upstream 0.5kb upstream 500 false Chr16: 12877201-12877700 Populus trichocarpa
Potri.016G125900 0.5kb downstream 0.5kb downstream 1542 true Chr16: 12875659-12877200 Populus trichocarpa
Potri.016G125900 0.5kb downstream 0.5kb downstream 500 false Chr16: 12875659-12876158 Populus trichocarpa
Potri.016G125900 1.0kb upstream 1.0kb upstream 2042 true Chr16: 12876159-12878200 Populus trichocarpa
Potri.016G125900 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12877201-12878200 Populus trichocarpa
Potri.016G125900 1.0kb downstream 1.0kb downstream 2042 true Chr16: 12875159-12877200 Populus trichocarpa
Potri.016G125900 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12875159-12876158 Populus trichocarpa
Potri.016G125900 2.0kb upstream 2.0kb upstream 3042 true Chr16: 12876159-12879200 Populus trichocarpa
Potri.016G125900 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12877201-12879200 Populus trichocarpa
Potri.016G125900 2.0kb downstream 2.0kb downstream 3042 true Chr16: 12874159-12877200 Populus trichocarpa
Potri.016G125900 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12874159-12876158 Populus trichocarpa
Potri.016G125900 5.0kb upstream 5.0kb upstream 6042 true Chr16: 12876159-12882200 Populus trichocarpa
Potri.016G125900 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12877201-12882200 Populus trichocarpa
Potri.016G125900 5.0kb downstream 5.0kb downstream 6042 true Chr16: 12871159-12877200 Populus trichocarpa
Potri.016G125900 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12871159-12876158 Populus trichocarpa
Potri.016G125900 10.0kb upstream 10.0kb upstream 11042 true Chr16: 12876159-12887200 Populus trichocarpa
Potri.016G125900 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12877201-12887200 Populus trichocarpa
Potri.016G125900 10.0kb downstream 10.0kb downstream 11042 true Chr16: 12866159-12877200 Populus trichocarpa
Potri.016G125900 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12866159-12876158 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.951        
cufflinks 0.366       Low
cufflinks 1.371        
cufflinks 0.788        
cufflinks 0.273       Low
cufflinks 2.227        
cufflinks 3.644       High
cufflinks 3.737       High
cufflinks 1.148        
cufflinks 0.642        
cufflinks 1.047        
cufflinks 4.115       High
cufflinks 0.672        
cufflinks 0.542        
cufflinks 0.667        
cufflinks 0.273       Low
cufflinks 0.568        
cufflinks 1.719        
cufflinks 0.724        
cufflinks 0.855        
cufflinks 1.311        
cufflinks 1.021        
cufflinks 1.676        
cufflinks 2.997       High
cufflinks 3.657        
cufflinks 2.404        
cufflinks 3.576        
cufflinks 2.474        
cufflinks 4.675       High
cufflinks 5.412       High

0 Strain