Gene : Potri.016G126200 P. trichocarpa v3.0
Defline:  similar to expressed protein in Arabidopsis thaliana; [ ortholog of At3g08780,] Genomic Order:  1262
Name:  ? Potri.016G126200 Secondary Identifier:  ? PAC:27013984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.016G126200 0.5kb upstream 0.5kb upstream 3490 true Chr16: 12912089-12915578 Populus trichocarpa
Potri.016G126200 0.5kb upstream 0.5kb upstream 500 false Chr16: 12915079-12915578 Populus trichocarpa
Potri.016G126200 0.5kb downstream 0.5kb downstream 3490 true Chr16: 12911589-12915078 Populus trichocarpa
Potri.016G126200 0.5kb downstream 0.5kb downstream 500 false Chr16: 12911589-12912088 Populus trichocarpa
Potri.016G126200 1.0kb upstream 1.0kb upstream 3990 true Chr16: 12912089-12916078 Populus trichocarpa
Potri.016G126200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12915079-12916078 Populus trichocarpa
Potri.016G126200 1.0kb downstream 1.0kb downstream 3990 true Chr16: 12911089-12915078 Populus trichocarpa
Potri.016G126200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12911089-12912088 Populus trichocarpa
Potri.016G126200 2.0kb upstream 2.0kb upstream 4990 true Chr16: 12912089-12917078 Populus trichocarpa
Potri.016G126200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12915079-12917078 Populus trichocarpa
Potri.016G126200 2.0kb downstream 2.0kb downstream 4990 true Chr16: 12910089-12915078 Populus trichocarpa
Potri.016G126200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12910089-12912088 Populus trichocarpa
Potri.016G126200 5.0kb upstream 5.0kb upstream 7990 true Chr16: 12912089-12920078 Populus trichocarpa
Potri.016G126200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12915079-12920078 Populus trichocarpa
Potri.016G126200 5.0kb downstream 5.0kb downstream 7990 true Chr16: 12907089-12915078 Populus trichocarpa
Potri.016G126200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12907089-12912088 Populus trichocarpa
Potri.016G126200 10.0kb upstream 10.0kb upstream 12990 true Chr16: 12912089-12925078 Populus trichocarpa
Potri.016G126200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12915079-12925078 Populus trichocarpa
Potri.016G126200 10.0kb downstream 10.0kb downstream 12990 true Chr16: 12902089-12915078 Populus trichocarpa
Potri.016G126200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12902089-12912088 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.134        
cufflinks 9.703        
cufflinks 9.299        
cufflinks 7.241       Low
cufflinks 7.904        
cufflinks 7.28       Low
cufflinks 7.281       Low
cufflinks 12.268     High High
cufflinks 9.262     High  
cufflinks 8.41        
cufflinks 7.913        
cufflinks 7.894        
cufflinks 8.607     High  
cufflinks 6.837       Low
cufflinks 7.12       Low
cufflinks 7.245       Low
cufflinks 8.144        
cufflinks 10.027     High High
cufflinks 9.23        
cufflinks 8.87        
cufflinks 10.067     High High
cufflinks 10.996     High High
cufflinks 8.407        
cufflinks 8.688     High  
cufflinks 13.364        
cufflinks 11.341        
cufflinks 10.301       Low
cufflinks 12.969        
cufflinks 14.099       High
cufflinks 13.549        

0 Strain