Gene : Potri.017G136300 P. trichocarpa v3.0
Defline:  (1 of 3) PTHR11615//PTHR11615:SF115 - NITRATE, FROMATE, IRON DEHYDROGENASE // NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL Genomic Order:  1363
Name:  ? Potri.017G136300 Secondary Identifier:  ? PAC:26984592
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5083 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.017G136300 0.5kb upstream 0.5kb upstream 8715 true Chr17: 14482066-14490780 Populus trichocarpa
Potri.017G136300 0.5kb upstream 0.5kb upstream 500 false Chr17: 14482066-14482565 Populus trichocarpa
Potri.017G136300 0.5kb downstream 0.5kb downstream 8715 true Chr17: 14482566-14491280 Populus trichocarpa
Potri.017G136300 0.5kb downstream 0.5kb downstream 500 false Chr17: 14490781-14491280 Populus trichocarpa
Potri.017G136300 1.0kb upstream 1.0kb upstream 9215 true Chr17: 14481566-14490780 Populus trichocarpa
Potri.017G136300 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14481566-14482565 Populus trichocarpa
Potri.017G136300 1.0kb downstream 1.0kb downstream 9215 true Chr17: 14482566-14491780 Populus trichocarpa
Potri.017G136300 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14490781-14491780 Populus trichocarpa
Potri.017G136300 2.0kb upstream 2.0kb upstream 10215 true Chr17: 14480566-14490780 Populus trichocarpa
Potri.017G136300 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14480566-14482565 Populus trichocarpa
Potri.017G136300 2.0kb downstream 2.0kb downstream 10215 true Chr17: 14482566-14492780 Populus trichocarpa
Potri.017G136300 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14490781-14492780 Populus trichocarpa
Potri.017G136300 5.0kb upstream 5.0kb upstream 13215 true Chr17: 14477566-14490780 Populus trichocarpa
Potri.017G136300 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14477566-14482565 Populus trichocarpa
Potri.017G136300 5.0kb downstream 5.0kb downstream 13215 true Chr17: 14482566-14495780 Populus trichocarpa
Potri.017G136300 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14490781-14495780 Populus trichocarpa
Potri.017G136300 10.0kb upstream 10.0kb upstream 18215 true Chr17: 14472566-14490780 Populus trichocarpa
Potri.017G136300 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14472566-14482565 Populus trichocarpa
Potri.017G136300 10.0kb downstream 10.0kb downstream 18215 true Chr17: 14482566-14500780 Populus trichocarpa
Potri.017G136300 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14490781-14500780 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.822        
cufflinks 3.879       High
cufflinks 1.982        
cufflinks 2.741        
cufflinks 1.502        
cufflinks 1.419        
cufflinks 2.499        
cufflinks 1.423        
cufflinks 1.847        
cufflinks 1.432        
cufflinks 1.304        
cufflinks 2.103        
cufflinks 1.387        
cufflinks 0.1     Low Low
cufflinks 0.59        
cufflinks 1.902        
cufflinks 1.319        
cufflinks 0.087     Low Low
cufflinks 3.045        
cufflinks 0.577        
cufflinks 1.791        
cufflinks 0.438       Low
cufflinks 1.713        
cufflinks 2.382        
cufflinks 2.396        
cufflinks 2.821        
cufflinks 2.846        
cufflinks 2.783        
cufflinks 1.983       Low
cufflinks 3.095        

0 Strain